RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 CSN2P05814 226 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 FBXW4P57775 412 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 GMFBP60983 142 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 LY6G6FQ5SQ64 297 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 D2HGDHQ8N465 521 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ACBD4Q8NC06 268 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 OR4S1Q8NGB4 309 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 OR1J2Q8NGS2 313 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 B3GNT4Q9C0J1 378 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 CENPMQ9NSP4 180 aa18.09■□□□□ 0.49
SHKBP1-225ENST00000600733 ARPC4-TTLL3A0A0A6YYG9 625 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF736B4DX44 427 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 NPIPA5E9PKD4 350 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 H3BUI4 141 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 PMS2P2O95744 297 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 CD37P11049 281 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 PTGS2P35354 604 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 POU3F1Q03052 451 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 GK2Q14410 553 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 SCGB2B2Q4G0G5 96 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 C12orf45Q8N5I9 185 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 MFFQ9GZY8 342 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 UPB1Q9UBR1 384 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 SUSD2Q9UGT4 822 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 NPIPA1Q9UND3 350 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 VDAC3Q9Y277 283 aa18.08■□□□□ 0.48
SHKBP1-225ENST00000600733 MELTFP08582 738 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF735P0CB33 412 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 CSNK1EP49674 416 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 RNF4P78317 190 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 TDGQ13569 410 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ATPAF1Q5TC12 328 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 CCDC107Q8WV48 283 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 TTYH1Q9H313 450 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 SCPEP1Q9HB40 452 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 FBXL2Q9UKC9 423 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 TRAV14DV4A0A0A6YYC5 116 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 OR6C76A6NM76 312 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 SPDEFO95238 335 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ISG15P05161 165 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 LIPCP11150 499 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ZP3P21754 424 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ACHEP22303 614 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 RIPPLY1Q0D2K3 151 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 NKPD1Q17RQ9 610 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 PXDC1Q5TGL8 231 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF660Q6AZW8 331 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 ARSKQ6UWY0 536 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 PRSS42Q7Z5A4 293 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 PLXDC1Q8IUK5 500 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 BPIFB2Q8N4F0 458 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 KCNK17Q96T54 332 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 SLC6A7Q99884 636 aa18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 SLC25A21Q9BQT8 299 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-225ENST00000600733 MEGF11A6BM72 1044 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 WIPF3A6NGB9 483 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 SHISA8B8ZZ34 492 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 EIF1AXP47813 144 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 NXPH1P58417 271 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 TUSC1Q2TAM9 212 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 NAXDQ8IW45 347 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 TMEM234Q8WY98 164 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 CMBLQ96DG6 245 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 RHBDD3Q9Y3P4 386 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 A6NIZ1 184 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 PIAS2O75928 621 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 CALCRP30988 508 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 RAP1BP61224 184 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 RAP1AP62834 184 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 C1orf100Q5SVJ3 147 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 LYPD6Q86Y78 171 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 STEAP2Q8NFT2 490 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 OR13C8Q8NGS7 320 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 EMC6Q9BV81 110 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 CNTD2Q9H8S5 307 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 FGF21Q9NSA1 209 aa18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 PHF3Q92576 2039 aaKnown RBP18.06■□□□□ 0.48
SHKBP1-225ENST00000600733 LOC390937A0A1W2PQ73 354 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 RFPL4AA6NLU0 287 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 RFPL4AL1F8VTS6 287 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 LGALS8O00214 317 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 DUX1O43812 170 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 RPA2P15927 270 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 TLE3Q04726 772 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 DHRS2Q13268 280 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 PCK2Q16822 640 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 PAPD4Q6PIY7 484 aaKnown RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 ZNF704Q6ZNC4 412 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 H1FNTQ75WM6 255 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 CD163Q86VB7 1156 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 FGGYQ96C11 551 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 SLCO5A1Q9H2Y9 848 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 SLC22A11Q9NSA0 550 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 GDF2Q9UK05 429 aaPredicted RBP18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 CA14Q9ULX7 337 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 HRH3Q9Y5N1 445 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 LOC100509620A0A075B734 347 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 H3BML4 177 aa18.05■□□□□ 0.48
SHKBP1-225ENST00000600733 RLN2P04090 185 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms