RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 NELFAQ9H3P2 528 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 ACKR4Q9NPB9 350 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 CLEC4AQ9UMR7 237 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 TRBV5-5A0A0J9YX44 114 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 NOTOA8MTQ0 251 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 MAGEB3O15480 346 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 GFRA3O60609 400 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 SYNGR4O95473 234 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 IGHV3-9P01782 118 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 EPXP11678 715 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 ZNF12P17014 697 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 ZNF84P51523 738 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 PRKXP51817 358 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 CNIH2Q6PI25 160 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 STAC2Q6ZMT1 411 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 GPR137CQ8N3F9 429 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 SAMD12Q8N8I0 201 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 FNDC9Q8TBE3 224 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 ALKBH3Q96Q83 286 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-218ENST00000600383 SDHCQ99643 169 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-218ENST00000600383 SLITRK2Q9H156 845 aa13.4□□□□□ -0.26
HIF3A-218ENST00000600383 MCTS1Q9ULC4 181 aaKnown RBP13.4□□□□□ -0.26
HIF3A-218ENST00000600383 TRGV5A0A0B4J1U4 118 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 SRSF10O75494 262 aaKnown RBP13.39□□□□□ -0.27
HIF3A-218ENST00000600383 THBS2P35442 1172 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF79Q15937 498 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 HES5Q5TA89 166 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 STEAP3Q658P3 488 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 LYSMD2Q8IV50 215 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 CENPSQ8N2Z9 138 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 G6PC2Q9NQR9 355 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 NOSIPQ9Y314 301 aaKnown RBP13.39□□□□□ -0.27
HIF3A-218ENST00000600383 RTTNQ86VV8 2226 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 FRYQ5TBA9 3013 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 A0A1B0GVC2 190 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 A6NIN4 97 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF878C9JN71 531 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 PDCD5O14737 125 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 TFECO14948 347 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-218ENST00000600383 KRT33AO76009 404 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 SNRPBP14678 240 aaKnown RBP13.39□□□□□ -0.27
HIF3A-218ENST00000600383 ATF1P18846 271 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 ELK1P19419 428 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 KCNMB1Q16558 191 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF181Q2M3W8 571 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 PYDC2Q56P42 97 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 LUZP2Q86TE4 346 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 TUSC5Q8IXB3 177 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 TRMT10AQ8TBZ6 339 aaKnown RBP13.39□□□□□ -0.27
HIF3A-218ENST00000600383 CALHM2Q9HA72 323 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 DHDHQ9UQ10 334 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 RCE1Q9Y256 329 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 SLC5A6Q9Y289 635 aa13.39□□□□□ -0.27
HIF3A-218ENST00000600383 NCOA6Q14686 2063 aaPredicted RBP13.38□□□□□ -0.27
HIF3A-218ENST00000600383 TRAV8-7A0A075B6U6 113 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 P2RY10O00398 339 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 MRPL33O75394 65 aaKnown RBP13.38□□□□□ -0.27
HIF3A-218ENST00000600383 SLC2A1P11166 492 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 EVX1P49640 407 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 LSM6P62312 80 aaKnown RBP13.38□□□□□ -0.27
HIF3A-218ENST00000600383 IL18Q14116 193 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 TRIM16LQ309B1 348 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 BCL2L15Q5TBC7 163 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 DNAAF1Q8NEP3 725 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF671Q8TAW3 534 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 KCTD12Q96CX2 325 aaKnown RBP13.38□□□□□ -0.27
HIF3A-218ENST00000600383 GFI1Q99684 422 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 V9GY05 133 aa13.38□□□□□ -0.27
HIF3A-218ENST00000600383 ACTL6AO96019 429 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF24P17028 368 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 APEX1P27695 318 aaKnown RBP13.37□□□□□ -0.27
HIF3A-218ENST00000600383 MMP16P51512 607 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 IGFL2Q6UWQ7 119 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 DCDC5Q6ZRR9 648 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 OR5H6Q8NGV6 325 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 NABP1Q96AH0 204 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 SCNM1Q9BWG6 230 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 FAM206AQ9NX38 181 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ADAM30Q9UKF2 790 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 CAMK2AQ9UQM7 478 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 TRAV17A0A0B4J275 112 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 LINC00854A0A1B0GVQ3 168 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ZNHIT1O43257 154 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 SLC19A2O60779 497 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 RAF1P04049 648 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF133P52736 654 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-218ENST00000600383 CLDN12P56749 244 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ENDOGQ14249 297 aaKnown RBP13.37□□□□□ -0.27
HIF3A-218ENST00000600383 P2RY14Q15391 338 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 BCL2A1Q16548 175 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 BAK1Q16611 211 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ZNF704Q6ZNC4 412 aaPredicted RBP13.37□□□□□ -0.27
HIF3A-218ENST00000600383 POC5Q8NA72 575 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 GJC3Q8NFK1 279 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 OR13C3Q8NGS6 347 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ASB5Q8WWX0 329 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 PBOV1Q9GZY1 135 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 ZDHHC11Q9H8X9 412 aa13.37□□□□□ -0.27
HIF3A-218ENST00000600383 PNRC2Q9NPJ4 139 aaKnown RBP13.37□□□□□ -0.27
HIF3A-218ENST00000600383 PAQR5Q9NXK6 330 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms