RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PERPQ96FX8 193 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 BCL2L14Q9BZR8 327 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 GRIP2Q9C0E4 1043 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 HDHD2Q9H0R4 259 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 CYB5R1Q9UHQ9 305 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 GDF2Q9UK05 429 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 AKAP9Q99996 3911 aa16.96■□□□□ 0.31
SHKBP1-214ENST00000597396 B9A039 149 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 PRODHO43272 600 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 SYNGR3O43761 229 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 LCKP06239 509 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 SPARCP09486 303 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 BMP4P12644 408 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 GSTT1P30711 240 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 GGT2P36268 569 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 POLR2IP36954 125 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 UCP2P55851 309 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 SNRPD2P62316 118 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 HIST1H3AP68431 136 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 ELFN2Q5R3F8 820 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 HIST2H3PS2Q5TEC6 136 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 LINC01590Q5TEZ4 76 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 C12orf73Q69YU5 71 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 C11orf71Q6IPW1 123 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 RGS7BPQ6MZT1 257 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 ARL9Q6T311 187 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 UNQ6126/PRO20091Q6UXV3 157 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 HIST2H3AQ71DI3 136 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 ERI1Q8IV48 349 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 TCEANCQ8N8B7 351 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 TRMT61AQ96FX7 289 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 PITX2Q99697 317 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 CACNG6Q9BXT2 260 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 WDR76Q9H967 626 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 ATPIF1Q9UII2 106 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 PMF1-BGLAPU3KQ54 211 aa16.95■□□□□ 0.3
SHKBP1-214ENST00000597396 OR6C6A6NF89 314 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 M0R129 80 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 OVOL3O00110 214 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 PRKYO43930 277 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 ABHD16AO95870 558 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 ANPEPP15144 967 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 RPS27P42677 84 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 PTH2RP49190 550 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 ZIK1Q3SY52 487 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 SLC35D3Q5M8T2 416 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 CFAP77Q6ZQR2 320 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 LRRC75A-AS1Q8N1F1 130 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 BBS1Q8NFJ9 593 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 OR1J1Q8NGS3 322 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 OR6N2Q8NGY6 317 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 ZMYND19Q96E35 227 aaPredicted RBP16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 INTS14Q96SY0 518 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 COQ7Q99807 217 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 PLK3Q9H4B4 646 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 ELOVL3Q9HB03 270 aa16.94■□□□□ 0.3
SHKBP1-214ENST00000597396 CHD3Q12873 2000 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 ZNF593O00488 134 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 TLX2O43763 284 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 WNT5AP41221 380 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 ATP5J2P56134 94 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 APOFQ13790 326 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 EFNB3Q15768 340 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 ABHD4Q8TB40 342 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 TMEM163Q8TC26 289 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 SLC7A6Q92536 515 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 MRPL24Q96A35 216 aaKnown RBP16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 C4orf45Q96LM5 186 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 GSX2Q9BZM3 304 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 ZNF701Q9NV72 531 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 H2AFY2Q9P0M6 372 aaPredicted RBP16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 FZR1Q9UM11 496 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 GRIP1Q9Y3R0 1128 aa16.93■□□□□ 0.3
SHKBP1-214ENST00000597396 SELENOVP59797 346 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 ERVS71-1P61550 626 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 ECH1Q13011 328 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 TRIP10Q15642 601 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 SWI5Q1ZZU3 235 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 MST1LQ2TV78 715 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 TEX30Q5JUR7 227 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 LCN1P1Q5VSP4 162 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 DCXRQ7Z4W1 244 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 ZNF101Q8IZC7 436 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 MAP6Q96JE9 813 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 IL4I1Q96RQ9 567 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 SLC29A1Q99808 456 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 ATF6BQ99941 703 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 SYT3Q9BQG1 590 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 MRPL37Q9BZE1 423 aaKnown RBP16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 CXXC4Q9H2H0 198 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 MED13LQ71F56 2210 aa16.92■□□□□ 0.3
SHKBP1-214ENST00000597396 DBHP09172 617 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 PSKH1P11801 424 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 PAX1P15863 534 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 SLC2A5P22732 501 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 CDC42P60953 191 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 PPP1CBP62140 327 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 ELF3P78545 371 aaPredicted RBP16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 PCK2Q16822 640 aa16.91■□□□□ 0.3
SHKBP1-214ENST00000597396 MSMPQ1L6U9 139 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms