RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 J3QW42 95 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 GNGT2O14610 69 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 SOX14O95416 240 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 NAT2P11245 290 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 TUBG1P23258 451 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 RASSF2P50749 326 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 COX10Q12887 443 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 PCGF3Q3KNV8 242 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 KRTAP21-3Q3LHN1 58 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 CCDC92Q53HC0 331 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-206ENST00000595974 SPATA46Q5T0L3 261 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 OTPQ5XKR4 325 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 TMEM154Q6P9G4 183 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 GJC3Q8NFK1 279 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 OR2T33Q8NG76 320 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 OR1F12Q8NHA8 337 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 KLF14Q8TD94 323 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-206ENST00000595974 GIPC3Q8TF64 312 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 IPCEF1Q8WWN9 437 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-206ENST00000595974 TSSK6Q9BXA6 273 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 CADM1Q9BY67 442 aaKnown RBP13.86□□□□□ -0.19
TRIM28-206ENST00000595974 OR2J1Q9GZK6 312 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 FN3KQ9H479 309 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 TUBG2Q9NRH3 451 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 NKIRAS2Q9NYR9 191 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 CGGBP1Q9UFW8 167 aaPredicted RBP13.86□□□□□ -0.19
TRIM28-206ENST00000595974 LHFPL6Q9Y693 200 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 JMJD1CQ15652 2540 aa13.86□□□□□ -0.19
TRIM28-206ENST00000595974 TANC2Q9HCD6 1990 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 RER1O15258 196 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 GSC2O15499 205 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 ATP5HO75947 161 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 NCR1O76036 304 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 GPANK1O95872 356 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 NGFP01138 241 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 HPXP02790 462 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 MPV17P39210 176 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 HIST1H3AP68431 136 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 MRPS11P82912 194 aaKnown RBP13.85□□□□□ -0.19
TRIM28-206ENST00000595974 RIN1Q13671 783 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 MEP1BQ16820 701 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 ALKBH6Q3KRA9 238 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 ELFN2Q5R3F8 820 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 HIST2H3PS2Q5TEC6 136 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 HIST2H3AQ71DI3 136 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.85□□□□□ -0.19
TRIM28-206ENST00000595974 OR2T4Q8NH00 348 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 RDH5Q92781 318 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 COG8Q96MW5 612 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 DCLRE1CQ96SD1 692 aaKnown RBP13.85□□□□□ -0.19
TRIM28-206ENST00000595974 COQ7Q99807 217 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 CHODLQ9H9P2 273 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 ARMC1Q9NVT9 282 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 KCNG2Q9UJ96 466 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 KLHL21Q9UJP4 597 aa13.85□□□□□ -0.19
TRIM28-206ENST00000595974 IGHV4-61A0A0C4DH41 118 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 PLSCR5A0PG75 271 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 E2F6O75461 281 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 TFP02787 698 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 ZNF23P17027 643 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 ACHEP22303 614 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 LIPAP38571 399 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 RGS6P49758 472 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 GZMKP49863 264 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 TEKQ02763 1124 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 ZMAT1Q5H9K5 638 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 C6orf52Q5T4I8 152 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 CYB561A3Q8NBI2 242 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 PAPD5Q8NDF8 572 aaKnown RBP13.84□□□□□ -0.19
TRIM28-206ENST00000595974 PROKR2Q8NFJ6 384 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 OR4Q3Q8NH05 313 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 TEX47Q8TBZ9 253 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 DDOQ99489 341 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 FEVQ99581 238 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 NIPSNAP1Q9BPW8 284 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 CYSLTR2Q9NS75 346 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 GRIP1Q9Y3R0 1128 aa13.84□□□□□ -0.19
TRIM28-206ENST00000595974 ANK3Q12955 4377 aaKnown RBP13.83□□□□□ -0.19
TRIM28-206ENST00000595974 FKBP6O75344 327 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 IFNGP01579 166 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 HLA-DQA2P01906 255 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 TACSTD2P09758 323 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 IGHV4-31P0DP07 118 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 MAGEB1P43366 347 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 ZNF81P51508 661 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 MMP15P51511 669 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 CBX1P83916 185 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 TMEM255AQ5JRV8 349 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 FAM209AQ5JX71 171 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 ZNF362Q5T0B9 420 aaPredicted RBP13.83□□□□□ -0.2
TRIM28-206ENST00000595974 SLC18B1Q6NT16 456 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 CORO6Q6QEF8 472 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 SLC37A3Q8NCC5 494 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 SLC7A6Q92536 515 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 RBM4Q9BWF3 364 aaKnown RBP13.83□□□□□ -0.2
TRIM28-206ENST00000595974 CDADC1Q9BWV3 514 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 MMADHCQ9H3L0 296 aaPredicted RBP13.83□□□□□ -0.2
TRIM28-206ENST00000595974 YAE1D1Q9NRH1 226 aa13.83□□□□□ -0.2
TRIM28-206ENST00000595974 PDP1Q9P0J1 537 aaPredicted RBP13.83□□□□□ -0.2
TRIM28-206ENST00000595974 DNAJB9Q9UBS3 223 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms