RNA–Protein interactions for RNA: ENST00000594297.1

FOXA3-202, Transcript of forkhead box A3, humanhuman

TSL 3

Gene FOXA3, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-202ENST00000594297 HLA-DQA2P01906 255 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 SPI1P17947 270 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 HTR1FP30939 366 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 TGFBR3Q03167 851 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 APOFQ13790 326 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 TIMM23BQ5SRD1 257 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 AADACL4Q5VUY2 407 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 SLC22A25Q6T423 547 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 GLB1L2Q8IW92 636 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.37□□□□□ -0.27
FOXA3-202ENST00000594297 BPIFB6Q8NFQ5 453 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 OR9Q1Q8NGQ5 310 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 OR6K6Q8NGW6 343 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 CNIH3Q8TBE1 160 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 FBLIM1Q8WUP2 373 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 PTP4A1Q93096 173 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 MCHR2Q969V1 340 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 MUCL1Q96DR8 90 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 NR1H4Q96RI1 486 aaPredicted RBP13.37□□□□□ -0.27
FOXA3-202ENST00000594297 NMNAT2Q9BZQ4 307 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 RACGAP1Q9H0H5 632 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 B9D1Q9UPM9 204 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 MYRFQ9Y2G1 1151 aa13.37□□□□□ -0.27
FOXA3-202ENST00000594297 PLCE1Q9P212 2302 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 EFCAB10A6NFE3 127 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 VWC2LB2RUY7 222 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 DHHO43323 396 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 CCDC159P0C7I6 412 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 ZNF823P16415 610 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 GABRB1P18505 474 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 NPR2P20594 1047 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 IGHV1-2P23083 117 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 MTNR1AP48039 350 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 FABP6P51161 128 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 EFNA4P52798 201 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 SH3BGRP55822 239 aaPredicted RBP13.36□□□□□ -0.27
FOXA3-202ENST00000594297 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 FBXW9Q5XUX1 488 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 ZBTB46Q86UZ6 589 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 OR6V1Q8N148 313 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 NSMAFQ92636 917 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 MYDGFQ969H8 173 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 RADILQ96JH8 1075 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 DDOQ99489 341 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 TEAD3Q99594 435 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 KCNN2Q9H2S1 579 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 MED20Q9H944 212 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 PLCXD1Q9NUJ7 323 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 TENM1Q9UKZ4 2725 aa13.36□□□□□ -0.27
FOXA3-202ENST00000594297 A0A1W2PPL8 197 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 OR5H1A6NKK0 313 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 TCF21O43680 179 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 WBP4O75554 376 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 FARS2O95363 451 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 TNFAIP8O95379 198 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 FADS2O95864 444 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 EEF1B2P24534 225 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 GSTT1P30711 240 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 ZNF83P51522 516 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 ROR2Q01974 943 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 C10orf128Q5T292 105 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 TSPO2Q5TGU0 170 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 TMEM108Q6UXF1 575 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 C12orf54Q6X4T0 127 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 RFLNBQ8N5W9 214 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 IPCEF1Q8WWN9 437 aaPredicted RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 MRPL48Q96GC5 212 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 CDADC1Q9BWV3 514 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 SEC61A2Q9H9S3 476 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 CRLF2Q9HC73 371 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 CCNB1IP1Q9NPC3 277 aa13.35□□□□□ -0.27
FOXA3-202ENST00000594297 CHCHD3Q9NX63 227 aaKnown RBP13.35□□□□□ -0.27
FOXA3-202ENST00000594297 IGHV4-61A0A0C4DH41 118 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 UPK3AO75631 287 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 RAD51DO75771 328 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 GYPBP06028 91 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 CTLA4P16410 223 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 CD40P25942 277 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 LAP3P28838 519 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 PYCR1P32322 319 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 NR4A2P43354 598 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 ZNF133P52736 654 aaPredicted RBP13.34□□□□□ -0.27
FOXA3-202ENST00000594297 CHN2P52757 468 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 HSF2Q03933 536 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 RAB40BQ12829 278 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 CR1LQ2VPA4 569 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 ZNF544Q6NX49 715 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 LRFN4Q6PJG9 635 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 SLC25A47Q6Q0C1 308 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 STX19Q8N4C7 294 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 ZNF433Q8N7K0 673 aaPredicted RBP13.34□□□□□ -0.27
FOXA3-202ENST00000594297 OR52N5Q8NH56 324 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 APH1BQ8WW43 257 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 RNFT2Q96EX2 444 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 TSSK2Q96PF2 358 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 CNN2Q99439 309 aaKnown RBP13.34□□□□□ -0.27
FOXA3-202ENST00000594297 PIMREGQ9BSJ6 248 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 SOX7Q9BT81 388 aa13.34□□□□□ -0.27
FOXA3-202ENST00000594297 GPR35Q9HC97 309 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms