RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 NPR2P20594 1047 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 RIDAP52758 137 aaKnown RBP13.35□□□□□ -0.27
VRK3-207ENST00000594092 HNRNPA0Q13151 305 aaKnown RBP13.35□□□□□ -0.27
VRK3-207ENST00000594092 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 GUSBP1Q15486 140 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 FAM27BQ5VT28 67 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 NSUN5P2Q63ZY6 315 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 OR7E24Q6IFN5 339 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 LRRC18Q8N456 261 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 SLAMF6Q96DU3 332 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 FOXB1Q99853 325 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 PDCD1LG2Q9BQ51 273 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 BARHL1Q9BZE3 327 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 WDR12Q9GZL7 423 aaKnown RBP13.35□□□□□ -0.27
VRK3-207ENST00000594092 C12orf49Q9H741 205 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 CENPMQ9NSP4 180 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 ZNF281Q9Y2X9 895 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 PEX16Q9Y5Y5 336 aa13.35□□□□□ -0.27
VRK3-207ENST00000594092 CLDN25C9JDP6 229 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 ZNF587BE7ETH6 402 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 RER1O15258 196 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 ZNF254O75437 659 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 TPOP07202 933 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 MYL9P24844 172 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 CALRP27797 417 aaKnown RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 MTNR1BP49286 362 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 STK11Q15831 433 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 ZNF829Q3KNS6 432 aaPredicted RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 YIF1BQ5BJH7 314 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 ZNF544Q6NX49 715 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 DEGS2Q6QHC5 323 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 GCNT2Q8N0V5 402 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 BORCS5Q969J3 196 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 SNRNP40Q96DI7 357 aaKnown RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 KCNS3Q9BQ31 491 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 SLX1AQ9BQ83 275 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 UPB1Q9UBR1 384 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 DVL2O14641 736 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 GABRA1P14867 456 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 B4GALT1P15291 398 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 OR3A2P47893 321 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 FOXG1P55316 489 aaPredicted RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 SF3B4Q15427 424 aaKnown RBP eCLIP13.34□□□□□ -0.27
VRK3-207ENST00000594092 PRR30Q53SZ7 412 aaPredicted RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 FDX2Q6P4F2 183 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 FAM214BQ7L5A3 538 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 CD163Q86VB7 1156 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 UBE2J2Q8N2K1 259 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 OR13C5Q8NGS8 318 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 OR2G2Q8NGZ5 317 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 OR5AK2Q8NH90 309 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 AP3S1Q92572 193 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 FBXO17Q96EF6 278 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 SH3GL3Q99963 347 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 COMMD4Q9H0A8 199 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 PNRC2Q9NPJ4 139 aaKnown RBP13.34□□□□□ -0.27
VRK3-207ENST00000594092 AKIP1Q9NQ31 210 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 FRRS1LQ9P0K9 344 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 PRSS50Q9UI38 385 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 FBXL3Q9UKT7 428 aa13.34□□□□□ -0.27
VRK3-207ENST00000594092 DOCK7Q96N67 2140 aa13.33□□□□□ -0.27
VRK3-207ENST00000594092 IQCMA0A1B0GVH7 501 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 TMEM212A6NML5 194 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 WDR1O75083 606 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 ARL6IP5O75915 188 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 ZFPL1O95159 310 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 CST2P09228 141 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 H2BFMP0C1H6 154 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 HIST1H3AP68431 136 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 ZMAT1Q5H9K5 638 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 HIST2H3PS2Q5TEC6 136 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 RTL6Q6ICC9 239 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 ZNF813Q6ZN06 617 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 HIST2H3AQ71DI3 136 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 RHOUQ7L0Q8 258 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 PRSS35Q8N3Z0 413 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 SLC22A24Q8N4F4 322 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 GJC3Q8NFK1 279 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 FAM57AQ8TBR7 257 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 C4orf45Q96LM5 186 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 SLC24A3Q9HC58 644 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 SMURF1Q9HCE7 757 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 ASF1BQ9NVP2 202 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 EMC9Q9Y3B6 208 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 ARHGAP21Q5T5U3 1957 aa13.33□□□□□ -0.28
VRK3-207ENST00000594092 MBD3L4A6NDZ8 208 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 MBD3L3A6NE82 208 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 MBD3L5A6NJ08 208 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 FIGNL2A6NMB9 653 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 OR4C45A6NMZ5 311 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 ZNF878C9JN71 531 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 SRSF10O75494 262 aaKnown RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 PNPP00491 289 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 PTGER4P35408 488 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 KIR2DL2P43627 348 aaPredicted RBP13.32□□□□□ -0.28
VRK3-207ENST00000594092 KIR3DL2P43630 455 aa13.32□□□□□ -0.28
VRK3-207ENST00000594092 RPS11P62280 158 aaKnown RBP eCLIP13.32□□□□□ -0.28
VRK3-207ENST00000594092 ARF1P84077 181 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms