RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 OR8B4Q96RC9 309 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 C1orf198Q9H425 327 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 POLE4Q9NR33 117 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 JKAMPQ9P055 326 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 CYB5R1Q9UHQ9 305 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 COA3Q9Y2R0 106 aaPredicted RBP11.12□□□□□ -0.63
VMP1-202ENST00000585847 POLR1DQ9Y2S0 133 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 EMC9Q9Y3B6 208 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 A3GALT2U3KPV4 340 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 CACNA1CQ13936 2221 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 ABCA12Q86UK0 2595 aa11.12□□□□□ -0.63
VMP1-202ENST00000585847 TRDV1A0A1B0GX56 115 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 TMEM212A6NML5 194 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 ZNF587BE7ETH6 402 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 H3BSA7 217 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 ZNF593O00488 134 aaPredicted RBP11.11□□□□□ -0.63
VMP1-202ENST00000585847 GATBO75879 557 aaKnown RBP11.11□□□□□ -0.63
VMP1-202ENST00000585847 APOL3O95236 402 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 SPARCP09486 303 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 MAPK3P27361 379 aaPredicted RBP11.11□□□□□ -0.63
VMP1-202ENST00000585847 RANBP1P43487 201 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 PER3P56645 1201 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 SCRN3Q0VDG4 424 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 CDK5R1Q15078 307 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 FAM27BQ5VT28 67 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 FOXB2Q5VYV0 432 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 DMKNQ6E0U4 476 aaPredicted RBP11.11□□□□□ -0.63
VMP1-202ENST00000585847 SLC16A12Q6ZSM3 486 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.11□□□□□ -0.63
VMP1-202ENST00000585847 DPY19L4Q7Z388 723 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 CCDC36Q8IYA8 594 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 CCDC54Q8NEL0 328 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 GJC3Q8NFK1 279 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 RPS4Y2Q8TD47 263 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 GATAD2BQ8WXI9 593 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 C4orf36Q96KX1 117 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 EMC6Q9BV81 110 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 SFXN3Q9BWM7 321 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 HDHD5Q9BXW7 423 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 RERGLQ9H628 205 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 SP140LQ9H930 580 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 MRPL22Q9NWU5 206 aaKnown RBP11.11□□□□□ -0.63
VMP1-202ENST00000585847 TAS2R16Q9NYV7 291 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 MALT1Q9UDY8 824 aa11.11□□□□□ -0.63
VMP1-202ENST00000585847 A0A1W2PPL8 197 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 ZNF878C9JN71 531 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 J3QLW9 94 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 OGG1O15527 345 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 ARL6IP5O75915 188 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 KRT33AO76009 404 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 ABHD16AO95870 558 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 CST2P09228 141 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 ZNF19P17023 458 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 CFL1P23528 166 aaKnown RBP11.1□□□□□ -0.63
VMP1-202ENST00000585847 MMP16P51512 607 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 RIDAP52758 137 aaKnown RBP11.1□□□□□ -0.63
VMP1-202ENST00000585847 GRB2P62993 217 aaKnown RBP11.1□□□□□ -0.63
VMP1-202ENST00000585847 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 FMODQ06828 376 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 CTF1Q16619 201 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 CNPY1Q3B7I2 92 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 YIF1BQ5BJH7 314 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 OR2G6Q5TZ20 316 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 LIPKQ5VXJ0 399 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 TFAP2EQ6VUC0 442 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 MRGPRGQ86SM5 289 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 KLBQ86Z14 1044 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 OR6K3Q8NGY3 331 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 LILRB4Q8NHJ6 448 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 C11orf40Q8WZ69 217 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 MED18Q9BUE0 208 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 COMMD4Q9H0A8 199 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 HDHD2Q9H0R4 259 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 PLSCR4Q9NRQ2 329 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 ZNF629Q9UEG4 869 aaPredicted RBP11.1□□□□□ -0.63
VMP1-202ENST00000585847 GNG8Q9UK08 70 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 FBXL3Q9UKT7 428 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 UGT2A1Q9Y4X1 527 aa11.1□□□□□ -0.63
VMP1-202ENST00000585847 TVP23AA6NH52 213 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 RGS9O75916 674 aaPredicted RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 ADRA2AP08913 450 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 HOXB1P14653 301 aaPredicted RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 CELP19835 753 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 AGAP20933 346 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 BMP5P22003 454 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 CHRNB4P30926 498 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 OR3A2P47893 321 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 SELENOPP49908 381 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 TFF3Q07654 80 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 EIF2B1Q14232 305 aaKnown RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 SSX1Q16384 188 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 PHYHD1Q5SRE7 291 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 MTFR2Q6P444 385 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 LRFN4Q6PJG9 635 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 ZNF474Q6S9Z5 364 aaPredicted RBP11.09□□□□□ -0.63
VMP1-202ENST00000585847 LINGO2Q7L985 606 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 SSX8Q7RTT4 187 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 KRT77Q7Z794 578 aa11.09□□□□□ -0.63
VMP1-202ENST00000585847 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms