RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 CDK1P06493 297 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 RNF224P0DH78 156 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 HTR5AP47898 357 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 SLC35A2P78381 396 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 EGR3Q06889 387 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 ECH1Q13011 328 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 RAB39AQ14964 217 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 CCDC92Q53HC0 331 aaPredicted RBP15.95■□□□□ 0.14
RFFL-211ENST00000584541 ZNF322Q6U7Q0 402 aaPredicted RBP15.95■□□□□ 0.14
RFFL-211ENST00000584541 RHOUQ7L0Q8 258 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 VASH1Q7L8A9 365 aaPredicted RBP15.95■□□□□ 0.14
RFFL-211ENST00000584541 KRT77Q7Z794 578 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.95■□□□□ 0.14
RFFL-211ENST00000584541 SNX33Q8WV41 574 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 ATF6BQ99941 703 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 JAM3Q9BX67 310 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 C1QTNF6Q9BXI9 259 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 MROQ9BYG7 248 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 WNT5BQ9H1J7 359 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 DUSP21Q9H596 190 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 NOX3Q9HBY0 568 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 IKZF2Q9UKS7 526 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 KLHDC2Q9Y2U9 406 aa15.95■□□□□ 0.14
RFFL-211ENST00000584541 CASKO14936 926 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 TNFAIP8O95379 198 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 IGKV3-15P01624 115 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 SERPINA5P05154 406 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 H2BFMP0C1H6 154 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 COX5BP10606 129 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 APLNRP35414 380 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 ZNF83P51522 516 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 IDH3GP51553 393 aaPredicted RBP15.94■□□□□ 0.14
RFFL-211ENST00000584541 ACTA2P62736 377 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 GRB2P62993 217 aaKnown RBP15.94■□□□□ 0.14
RFFL-211ENST00000584541 ACTG2P63267 376 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 C3orf36Q3SXR2 165 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 PLEKHG7Q6ZR37 379 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 SPATC1Q76KD6 591 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 OR1J2Q8NGS2 313 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 OR1F12Q8NHA8 337 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 LINC01560Q8TB33 94 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 RNF133Q8WVZ7 376 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 DACH2Q96NX9 599 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 NR1H4Q96RI1 486 aaPredicted RBP15.94■□□□□ 0.14
RFFL-211ENST00000584541 COQ7Q99807 217 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 TTTY10Q9BZA0 68 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 CCDC90BQ9GZT6 254 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 SLC24A3Q9HC58 644 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 ERVK13-1Q9NX77 482 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 CRNNQ9UBG3 495 aaPredicted RBP15.94■□□□□ 0.14
RFFL-211ENST00000584541 ATPIF1Q9UII2 106 aa15.94■□□□□ 0.14
RFFL-211ENST00000584541 OR6C6A6NF89 314 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 PRSS44E7EML9 344 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 M0R1B8 84 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 SYNGR3O43761 229 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 ZNF254O75437 659 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 KRT8P05787 483 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 ZNF14P17017 642 aaPredicted RBP15.93■□□□□ 0.14
RFFL-211ENST00000584541 STOMP27105 288 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 HSD11B1P28845 292 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 KIR2DL3P43628 341 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 GDI2P50395 445 aaKnown RBP15.93■□□□□ 0.14
RFFL-211ENST00000584541 ZNF85Q03923 595 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 SNTB1Q13884 538 aaKnown RBP15.93■□□□□ 0.14
RFFL-211ENST00000584541 GALEQ14376 348 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 TBC1D28Q2M2D7 210 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 KCTD21Q4G0X4 260 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 DEGS2Q6QHC5 323 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 FAM220AQ7Z4H9 259 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 LHFPL3Q86UP9 236 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 ZNF679Q8IYX0 411 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 IL17RDQ8NFM7 739 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 SPTSSAQ969W0 71 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 OR8B4Q96RC9 309 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 AMELYQ99218 206 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 ALG8Q9BVK2 526 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 PNRC2Q9NPJ4 139 aaKnown RBP15.93■□□□□ 0.14
RFFL-211ENST00000584541 DDX28Q9NUL7 540 aaKnown RBP15.93■□□□□ 0.14
RFFL-211ENST00000584541 PAK1IP1Q9NWT1 392 aaPredicted RBP15.93■□□□□ 0.14
RFFL-211ENST00000584541 ERVK-18Q9QC07 812 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 RELNP78509 3460 aa15.93■□□□□ 0.14
RFFL-211ENST00000584541 MRPS14O60783 128 aaKnown RBP15.92■□□□□ 0.14
RFFL-211ENST00000584541 IGLV1-44P01699 117 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 THBDP07204 575 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 APEX1P27695 318 aaKnown RBP15.92■□□□□ 0.14
RFFL-211ENST00000584541 ROM1Q03395 351 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 LRRN1Q6UXK5 716 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 TMPRSS11AQ6ZMR5 421 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 C22orf34Q6ZV56 151 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 SSX6Q7RTT6 188 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 PRSS48Q7RTY5 328 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 KCTD20Q7Z5Y7 419 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 KLHL36Q8N4N3 616 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 RFLNBQ8N5W9 214 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 CPEB3Q8NE35 698 aaKnown RBP15.92■□□□□ 0.14
RFFL-211ENST00000584541 SLC30A7Q8NEW0 376 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 OR10S1Q8NGN2 331 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 ZNF75AQ96N20 296 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 KCNS3Q9BQ31 491 aa15.92■□□□□ 0.14
RFFL-211ENST00000584541 NIPAL2Q9H841 368 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms