RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 ZNF181Q2M3W8 571 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 ZNF404Q494X3 552 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 ALG10Q5BKT4 473 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 PAGE3Q5JUK9 113 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 INTS11Q5TA45 600 aaKnown RBP11.15□□□□□ -0.62
COPS3-218ENST00000584216 FOXL2NBQ6ZUU3 175 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 MAVSQ7Z434 540 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 RBM45Q8IUH3 476 aaKnown RBP11.15□□□□□ -0.62
COPS3-218ENST00000584216 FITM2Q8N6M3 262 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 OR13G1Q8NGZ3 307 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 GATAD2BQ8WXI9 593 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 PTP4A1Q93096 173 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 CPPED1Q9BRF8 314 aaPredicted RBP11.15□□□□□ -0.62
COPS3-218ENST00000584216 TMEM246Q9BRR3 403 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 TRIM15Q9C019 465 aa11.15□□□□□ -0.62
COPS3-218ENST00000584216 TMEM120BA0PK00 339 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 HTR3EA5X5Y0 456 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 A6NIZ1 184 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 TNFRSF13BO14836 293 aaPredicted RBP11.14□□□□□ -0.63
COPS3-218ENST00000584216 DOK2O60496 412 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 LIPFP07098 398 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 TSPAN19P0C672 248 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 NPY4RP50391 375 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 WDR4P57081 412 aaKnown RBP11.14□□□□□ -0.63
COPS3-218ENST00000584216 TAS2R41P59536 307 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 RAP1BP61224 184 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 RPL27P61353 136 aaKnown RBP11.14□□□□□ -0.63
COPS3-218ENST00000584216 RAP1AP62834 184 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 TOP3AQ13472 1001 aaPredicted RBP11.14□□□□□ -0.63
COPS3-218ENST00000584216 TNFAIP8L3Q5GJ75 292 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 CD276Q5ZPR3 534 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 WDR93Q6P2C0 686 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 EPGNQ6UW88 154 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 DCDC5Q6ZRR9 648 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 FUNDC1Q8IVP5 155 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 OR5L1Q8NGL2 311 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 MOSPD2Q8NHP6 518 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 PFN4Q8NHR9 129 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 LINC01006Q8NI28 216 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 TMEM239Q8WW34 195 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 MEGF10Q96KG7 1140 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 PRSS27Q9BQR3 290 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 NKIRAS1Q9NYS0 192 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 MED31Q9Y3C7 131 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 USH1CQ9Y6N9 552 aa11.14□□□□□ -0.63
COPS3-218ENST00000584216 C5orf63A6NC05 138 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 SGCEO43556 437 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 ZNF205O95201 554 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 CYB5R3P00387 301 aaPredicted RBP11.13□□□□□ -0.63
COPS3-218ENST00000584216 RGS6P49758 472 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 PROK1P58294 105 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 ENDOGQ14249 297 aaKnown RBP11.13□□□□□ -0.63
COPS3-218ENST00000584216 KCNJ8Q15842 424 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 RUNDC3AQ59EK9 446 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 WDR25Q64LD2 544 aaPredicted RBP11.13□□□□□ -0.63
COPS3-218ENST00000584216 GDPGP1Q6ZNW5 385 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 OR8G5Q8NG78 346 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 OR4D11Q8NGI4 311 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 ZNF420Q8TAQ5 688 aaPredicted RBP11.13□□□□□ -0.63
COPS3-218ENST00000584216 TMEM255BQ8WV15 326 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 LRTOMTQ8WZ04 291 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 RASD2Q96D21 266 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 ZNF582Q96NG8 517 aaPredicted RBP11.13□□□□□ -0.63
COPS3-218ENST00000584216 PCGF1Q9BSM1 259 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 POLE4Q9NR33 117 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 ACOXLQ9NUZ1 547 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 HIF3AQ9Y2N7 669 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 STARD10Q9Y365 291 aa11.13□□□□□ -0.63
COPS3-218ENST00000584216 ZNF879B4DU55 563 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 C3orf80F5H4A9 247 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 GPR137BO60478 399 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 TOX4O94842 621 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 OR5F1O95221 314 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 TSPAN15O95858 294 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 THRBP10828 461 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 CFHR2P36980 270 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 RBMXP38159 391 aaKnown RBP11.12□□□□□ -0.63
COPS3-218ENST00000584216 SLC18A1P54219 525 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 KRTAP10-3P60369 221 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 LAPTM4AQ15012 233 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 REC114Q7Z4M0 266 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 TSPYL5Q86VY4 417 aaPredicted RBP11.12□□□□□ -0.63
COPS3-218ENST00000584216 OR5AS1Q8N127 324 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 PCYOX1LQ8NBM8 494 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 OR10AD1Q8NGE0 317 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 FAM110DQ8TAY7 271 aaPredicted RBP11.12□□□□□ -0.63
COPS3-218ENST00000584216 ERGIC1Q969X5 290 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 DPAGT1Q9H3H5 408 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 POFUT1Q9H488 388 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 RABEP2Q9H5N1 569 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 C20orf141Q9NUB4 165 aa11.12□□□□□ -0.63
COPS3-218ENST00000584216 PIN1P1O15428 100 aa11.11□□□□□ -0.63
COPS3-218ENST00000584216 CSF1P09603 554 aa11.11□□□□□ -0.63
COPS3-218ENST00000584216 IFNA8P32881 189 aa11.11□□□□□ -0.63
COPS3-218ENST00000584216 AQP6Q13520 282 aa11.11□□□□□ -0.63
COPS3-218ENST00000584216 AGKQ53H12 422 aa11.11□□□□□ -0.63
COPS3-218ENST00000584216 METTL11BQ5VVY1 283 aa11.11□□□□□ -0.63
COPS3-218ENST00000584216 RUSC1-AS1Q66K80 236 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms