RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NPEPL1Q8NDH3 523 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 OR6K6Q8NGW6 343 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 OR6N1Q8NGY5 312 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 PTP4A1Q93096 173 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 RASD2Q96D21 266 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 TXNDC15Q96J42 360 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 ALKBH3Q96Q83 286 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 TSPAN32Q96QS1 320 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 NMNAT3Q96T66 252 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 EMC6Q9BV81 110 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 NMNAT2Q9BZQ4 307 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 WDR12Q9GZL7 423 aaKnown RBP11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 ADGRL4Q9HBW9 690 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 CLEC2DQ9UHP7 191 aa11.85□□□□□ -0.51
CSNK1D-220ENST00000581737 J3QRE1 110 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 APOL3O95236 402 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 SERPINA3P01011 423 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 TACSTD2P09758 323 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 EDNRAP25101 427 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 S100A5P33763 92 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 CLRN1P58418 232 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 LSM3P62310 102 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 FAM27E3Q08E93 113 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 CAMK2DQ13557 499 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 DCTN2Q13561 401 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 STK11Q15831 433 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 MOGQ16653 247 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 ZNF362Q5T0B9 420 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 SFRP5Q5T4F7 317 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 C1QTNF12Q5T7M4 302 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 LIPKQ5VXJ0 399 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 CARD17Q5XLA6 110 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 OR7E24Q6IFN5 339 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 PAMR1Q6UXH9 720 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 STAC2Q6ZMT1 411 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 SHFQ7M4L6 423 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 SLC16A9Q7RTY1 509 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 CXorf67Q86X51 503 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 PHC2Q8IXK0 858 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 C20orf196Q8IYI0 205 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 C1orf162Q8NEQ5 155 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 NOXO1Q8NFA2 376 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 SNX33Q8WV41 574 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 SPRYD4Q8WW59 207 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 GATAD2BQ8WXI9 593 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 KCTD7Q96MP8 289 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 ALG12Q9BV10 488 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 ULBP2Q9BZM5 246 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 MMP27Q9H306 513 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 LIME1Q9H400 295 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 RPRD1BQ9NQG5 326 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 BABAM2Q9NXR7 383 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 CRNNQ9UBG3 495 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 NDRG3Q9UGV2 375 aa11.84□□□□□ -0.51
CSNK1D-220ENST00000581737 CIB4A0PJX0 185 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 TUBAL3A6NHL2 446 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 RPL36A-HNRNPH2H7BZ11 118 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 ARHGEF9O43307 516 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 MRPL3P09001 348 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 PGA4P0DJD7 388 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 PGA3P0DJD8 388 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 NR4A1P22736 598 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 IGHV1-2P23083 117 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 NCS1P62166 190 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 AQP6Q13520 282 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 OR2G6Q5TZ20 316 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 BHLHA15Q7RTS1 189 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 DMRTC2Q8IXT2 367 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 C17orf78Q8N4C9 275 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 ZNF433Q8N7K0 673 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 ZNF519Q8TB69 540 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 NDNFQ8TB73 568 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 DYNC2LI1Q8TCX1 351 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 TMEM54Q969K7 222 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 ZMYND19Q96E35 227 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 HCAR1Q9BXC0 346 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 CXXC4Q9H2H0 198 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 PLGRKTQ9HBL7 147 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 PALMDQ9NP74 551 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 GLTPQ9NZD2 209 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 VSX1Q9NZR4 365 aaPredicted RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 ZNF346Q9UL40 294 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 SPG11Q96JI7 2443 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
CSNK1D-220ENST00000581737 ABCA2Q9BZC7 2435 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 TRDV1A0A1B0GX56 115 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 PRSS37A4D1T9 235 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 OR6C68A6NDL8 312 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 UPK3AO75631 287 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 LYZL6O75951 148 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 GYPBP06028 91 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 GAAP10253 952 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 HOXC12P31275 282 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 CCKARP32238 428 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 KIR2DL3P43628 341 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 ZNF846Q147U1 533 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 SSX1Q16384 188 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 ZNF404Q494X3 552 aa11.82□□□□□ -0.52
CSNK1D-220ENST00000581737 CCDC58Q4VC31 144 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms