RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 ID4P47928 161 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 DIO1P49895 249 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 RBP2P50120 134 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 RIDAP52758 137 aaKnown RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 RPS11P62280 158 aaKnown RBP eCLIP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 LCN6P62502 163 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 MEF2DQ14814 521 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 HMGN3Q15651 99 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 WDR88Q6ZMY6 472 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 DPY19L4Q7Z388 723 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 NAXEQ8NCW5 288 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 SEMA6DQ8NFY4 1073 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 C6orf106Q9H6K1 298 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 PELI2Q9HAT8 420 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 KCNG2Q9UJ96 466 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF346Q9UL40 294 aaKnown RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 MEMO1Q9Y316 297 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1B0GWA3 101 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 TERTO14746 1132 aaKnown RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 HPGDP15428 266 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 PI3P19957 117 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 SPOCK1Q08629 439 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 PRAMEF8Q5VWM4 474 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 PRAMEF7Q5VXH5 474 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 MFSD12Q6NUT3 480 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 DHRS11Q6UWP2 260 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF793Q6ZN11 406 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF619Q8N2I2 560 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 EDAQ92838 391 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 JSRP1Q96MG2 331 aaPredicted RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 TWSG1Q9GZX9 223 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF700Q9H0M5 742 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 OBP2AQ9NY56 170 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 WASF3Q9UPY6 502 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 AMDHD2Q9Y303 409 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 CENPVL1A0A0U1RR11 272 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 LATO43561 262 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 IFNA10P01566 189 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 P2RY4P51582 365 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 RAP1AP62834 184 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 DUSP2Q05923 314 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 NFATC4Q14934 902 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF813Q6ZN06 617 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 TRAPPC6BQ86SZ2 158 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 OR10AC1Q8NH08 325 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 RBM14Q96PK6 669 aaKnown RBP8.66□□□□□ -1.02
CCDC40-212ENST00000574799 CDC6Q99741 560 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 TEX101Q9BY14 249 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 TRIM2Q9C040 744 aa8.66□□□□□ -1.02
CCDC40-212ENST00000574799 A0A087WV48 116 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 A0A1W2PQF6 199 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 IGLON5A6NGN9 336 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 MBTPS2O43462 519 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF354AO60765 605 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 CLEC3AO75596 197 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 PRNPP04156 253 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 CRHP06850 196 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 HEXAP06865 529 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 ADRA2CP18825 462 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 OR3A2P47893 321 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 ZNF84P51523 738 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 DVL1P1P54792 670 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 RUNX3Q13761 415 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 SOHLH1Q5JUK2 328 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 DCST2Q5T1A1 773 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 TCEAL6Q6IPX3 200 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 ADAMTSL4Q6UY14 1074 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 COMMD2Q86X83 199 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 SHISA5Q8N114 240 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 KDM8Q8N371 416 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 CLEC1AQ8NC01 280 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 UTP23Q9BRU9 249 aaKnown RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 CNTNAP3Q9BZ76 1288 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 GDE1Q9NZC3 331 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 TMED7Q9Y3B3 224 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 SPACA6W5XKT8 324 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 OR10H2O60403 315 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 SLC34A2O95436 690 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 PCCBP05166 539 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 OR8U8P0C7N1 319 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 FABP4P15090 132 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 COL9A1P20849 921 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 TRA2BP62995 288 aaKnown RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 TMEM35AQ53FP2 167 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 STPG1Q5TH74 334 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 RPL7L1Q6DKI1 246 aaKnown RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 FAM111BQ6SJ93 734 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 OR56B1Q8NGI3 324 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 OR1J1Q8NGS3 322 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 SLC41A2Q96JW4 573 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 SDF2Q99470 211 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 GFI1Q99684 422 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 ALX4Q9H161 411 aaPredicted RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 DEC1Q9P2X7 70 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 ADAM29Q9UKF5 820 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 GPR34Q9UPC5 381 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 DTX4Q9Y2E6 619 aa8.65□□□□□ -1.02
CCDC40-212ENST00000574799 LSM5Q9Y4Y9 91 aaKnown RBP8.65□□□□□ -1.02
CCDC40-212ENST00000574799 A0A087WZY1 265 aa8.65□□□□□ -1.03
CCDC40-212ENST00000574799 C9orf170A2RU37 121 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms