RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 B9A039 149 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 HLA-HP01893 362 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 CSF3P09919 207 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 OR4A8P0C604 315 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 BMP4P12644 408 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 NR2C1P13056 603 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 SLC25A16P16260 332 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 SERPINF1P36955 418 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 SLC25A1P53007 311 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 FMODQ06828 376 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 LOXL1Q08397 574 aaPredicted RBP13.05□□□□□ -0.32
RAB40B-203ENST00000570676 DBPQ10586 325 aaPredicted RBP13.05□□□□□ -0.32
RAB40B-203ENST00000570676 HIST3H3Q16695 136 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 TMEM249Q2WGJ8 235 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 SLC25A30Q5SVS4 291 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 THEM4Q5T1C6 240 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF813Q6ZN06 617 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 CCDC36Q8IYA8 594 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 BBS1Q8NFJ9 593 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 OR4F15Q8NGB8 312 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 OR2T4Q8NH00 348 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 CNIH3Q8TBE1 160 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 FNDC8Q8TC99 324 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 APH1BQ8WW43 257 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 PTP4A1Q93096 173 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 Q96MT0 163 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 TSSK2Q96PF2 358 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 NMNAT2Q9BZQ4 307 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 NUAK2Q9H093 628 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 OR51V1Q9H2C8 321 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 PLK3Q9H4B4 646 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 SRA1Q9HD15 236 aaKnown RBP13.05□□□□□ -0.32
RAB40B-203ENST00000570676 B3GAT2Q9NPZ5 323 aa13.05□□□□□ -0.32
RAB40B-203ENST00000570676 H2AFY2Q9P0M6 372 aaPredicted RBP13.05□□□□□ -0.32
RAB40B-203ENST00000570676 VWC2LB2RUY7 222 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 SLC16A7O60669 478 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 ENTPD6O75354 484 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 WBP4O75554 376 aaKnown RBP13.04□□□□□ -0.32
RAB40B-203ENST00000570676 F12P00748 615 aaPredicted RBP13.04□□□□□ -0.32
RAB40B-203ENST00000570676 GYPBP06028 91 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 QDPRP09417 244 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 CLUP10909 449 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF14P17017 642 aaPredicted RBP13.04□□□□□ -0.32
RAB40B-203ENST00000570676 SPI1P17947 270 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 CRABP1P29762 137 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 PYCR1P32322 319 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 CAPZA2P47755 286 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 PPOXP50336 477 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 CDK5R2Q13319 367 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 APOFQ13790 326 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 OCLNQ16625 522 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 GSG1Q2KHT4 349 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 KLHL12Q53G59 568 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 AADACL4Q5VUY2 407 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 MEDAGQ5VYS4 303 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 NXNL2Q5VZ03 156 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 LRFN4Q6PJG9 635 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 DNM1P34Q6PK57 102 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 VHLLQ6RSH7 139 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 GID4Q8IVV7 300 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 OR6V1Q8N148 313 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 PROKR2Q8NFJ6 384 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 FBLIM1Q8WUP2 373 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 NSMAFQ92636 917 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 MCHR2Q969V1 340 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 NMD3Q96D46 503 aaKnown RBP13.04□□□□□ -0.32
RAB40B-203ENST00000570676 ZNF582Q96NG8 517 aaPredicted RBP13.04□□□□□ -0.32
RAB40B-203ENST00000570676 FOXB1Q99853 325 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 FKBP7Q9Y680 259 aa13.04□□□□□ -0.32
RAB40B-203ENST00000570676 JMJD1CQ15652 2540 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 DCTN6O00399 190 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 KHDRBS3O75525 346 aaKnown RBP13.03□□□□□ -0.32
RAB40B-203ENST00000570676 CTLA4P16410 223 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 FMO3P31513 532 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 THBS4P35443 961 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 CENPAP49450 140 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 RPS7P62081 194 aaKnown RBP13.03□□□□□ -0.32
RAB40B-203ENST00000570676 TEKQ02763 1124 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 SNTB2Q13425 540 aaKnown RBP13.03□□□□□ -0.32
RAB40B-203ENST00000570676 SMN1Q16637 294 aaKnown RBP13.03□□□□□ -0.32
RAB40B-203ENST00000570676 SLC25A47Q6Q0C1 308 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 OR51L1Q8NGJ5 315 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 RFKQ969G6 155 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 MS4A3Q96HJ5 214 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 YAE1D1Q9NRH1 226 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 UBAP1Q9NZ09 502 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 B9D1Q9UPM9 204 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 LRCH1Q9Y2L9 728 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 PCDHGB5Q9Y5G0 923 aa13.03□□□□□ -0.32
RAB40B-203ENST00000570676 IGLV1-36A0A0B4J1U3 117 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 IGKV1D-43A0A0B4J1Z2 117 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 TMEM129A0AVI4 362 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 PRODHO43272 600 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 SLC2A5P22732 501 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 ZNF133P52736 654 aaPredicted RBP13.02□□□□□ -0.33
RAB40B-203ENST00000570676 MSMPQ1L6U9 139 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 C6orf141Q5SZD1 244 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 LAIR2Q6ISS4 152 aa13.02□□□□□ -0.33
RAB40B-203ENST00000570676 MEPCEQ7L2J0 689 aaKnown RBP13.02□□□□□ -0.33
RAB40B-203ENST00000570676 ZBTB46Q86UZ6 589 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms