RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 OR52A1Q9UKL2 312 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 FBXL3Q9UKT7 428 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 TCFL5Q9UL49 500 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PAIP2BQ9ULR5 123 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 HHLA2Q9UM44 414 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 VDAC3Q9Y277 283 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 FARSAQ9Y285 508 aaKnown RBP4.79□□□□□ -1.64
SF3B3-213ENST00000569687 LOXL2Q9Y4K0 774 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 N6AMT1Q9Y5N5 214 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 NUBP2Q9Y5Y2 271 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 SPEGQ15772 3267 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 PCNX3Q9H6A9 2034 aa4.79□□□□□ -1.64
SF3B3-213ENST00000569687 ASCC3Q8N3C0 2202 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 A0A0A6YYH2 397 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 IGKV1D-43A0A0B4J1Z2 117 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 LOC100289279A0A1B0GTE1 492 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM269A0A1B0GVZ9 245 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 LOC390937A0A1W2PQ73 354 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 A6NJ64 397 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ANXA2P2A6NMY6 339 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 GJE1A6NN92 205 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF726A6NNF4 738 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF814B7Z6K7 855 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SHISA8B8ZZ34 492 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 H3BML4 177 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 LINC01387J3KSC0 135 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ACOT7O00154 380 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SULT2B1O00204 365 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 CDX4O14627 284 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TFECO14948 347 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 LDLRAD4O15165 306 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 KRT33AO76009 404 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 STK17BO94768 372 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 GLSO94925 669 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 DHFRP00374 187 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 CD2P06729 351 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ANXA2P07355 339 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 CELA2AP08217 269 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 CCL3P10147 92 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 NAT2P11245 290 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 NR2C1P13056 603 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF43P17038 809 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 RPS27P42677 84 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SOX2P48431 317 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 B3GALT5-AS1P59052 145 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 AP3S2P59780 193 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 LSM6P62312 80 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SUMO1P63165 101 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 CSNK2A1P68400 391 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 HIST1H3AP68431 136 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 DGCR2P98153 550 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SSBP1Q04837 148 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 EIF3IQ13347 325 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TATDN3Q17R31 274 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 C2orf76Q3KRA6 126 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TBRG1Q3YBR2 411 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ELFN2Q5R3F8 820 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 C10orf128Q5T292 105 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ATAD3CQ5T2N8 411 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 HIST2H3PS2Q5TEC6 136 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 GLT8D1Q68CQ7 371 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ASPHD2Q6ICH7 369 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 JMJD6Q6NYC1 403 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF529Q6P280 563 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 Q6ZSR3 168 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 CREB3L2Q70SY1 520 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 HIST2H3AQ71DI3 136 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 BTN2A1Q7KYR7 527 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 RAB11FIP2Q7L804 512 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 LINGO2Q7L985 606 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 PRSS45Q7RTY3 260 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TIPARPQ7Z3E1 657 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 DCXRQ7Z4W1 244 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF227Q86WZ6 799 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ELMOD2Q8IZ81 293 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 UBE2J2Q8N2K1 259 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TOMM5Q8N4H5 51 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM156Q8N614 296 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 IL22RA1Q8N6P7 574 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 PRSS33Q8NF86 280 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 OR1J4Q8NGS1 313 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 OR10AC1Q8NH08 325 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SYNPRQ8TBG9 265 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 KCNE4Q8WWG9 221 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 FCAMRQ8WWV6 532 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 TMEM54Q969K7 222 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 PTX4Q96A99 478 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 FAM3DQ96BQ1 224 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ORAI1Q96D31 301 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SCMH1Q96GD3 660 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 ZNF486Q96H40 463 aaPredicted RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 MED30Q96HR3 178 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 RNF170Q96K19 258 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 OR5B2Q96R09 309 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 OR2M2Q96R28 347 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 PRRX2Q99811 253 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 UTP23Q9BRU9 249 aaKnown RBP4.78□□□□□ -1.64
SF3B3-213ENST00000569687 EDEM2Q9BV94 578 aa4.78□□□□□ -1.64
SF3B3-213ENST00000569687 SF3B5Q9BWJ5 86 aaKnown RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms