RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 EIF3KQ9UBQ5 218 aaKnown RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 CGGBP1Q9UFW8 167 aaPredicted RBP6.64□□□□□ -1.35
CDH3-209ENST00000569080 ATPIF1Q9UII2 106 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 GPR160Q9UJ42 338 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 AURKCQ9UQB9 309 aa6.64□□□□□ -1.35
CDH3-209ENST00000569080 OR6C68A6NDL8 312 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 B4DSR2 109 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 J3QW42 95 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 BHLHE40O14503 412 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 RER1O15258 196 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 PPIHO43447 177 aaKnown RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 SPRY3O43610 288 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 OR10H3O60404 316 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 GMNNO75496 209 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 FAM107AO95990 144 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 IFNA2P01563 188 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 IGHV2-5P01817 119 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 MSMBP08118 114 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 DBHP09172 617 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 PSKH1P11801 424 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 KITLGP21583 273 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 ANOS1P23352 680 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 GCH1P30793 250 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 SLC6A6P31641 620 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 RBMXP38159 391 aaKnown RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 GUCA1AP43080 201 aaPredicted RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 SMIM11AP58511 58 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 MS4A2Q01362 244 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 COX10Q12887 443 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 TSPAN31Q12999 210 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 TSTQ16762 297 aaKnown RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 RSPO1Q2MKA7 263 aaPredicted RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 KRTAP24-1Q3LI83 254 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 MTX3Q5HYI7 312 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 ZNF362Q5T0B9 420 aaPredicted RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 AVPI1Q5T686 147 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 LCN8Q6JVE9 175 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 SLC18B1Q6NT16 456 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 LEG1Q6P5S2 330 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 UNQ6126/PRO20091Q6UXV3 157 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 CYP2R1Q6VVX0 501 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 CFAP77Q6ZQR2 320 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 NPEPL1Q8NDH3 523 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 OR1F12Q8NHA8 337 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 MCUR1Q96AQ8 359 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 SAMD8Q96LT4 415 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 ERMAPQ96PL5 475 aaPredicted RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 NMNAT3Q96T66 252 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 DDOQ99489 341 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 PLA2G12AQ9BZM1 189 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 FN3KQ9H479 309 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 EGLN3Q9H6Z9 239 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 ELOVL3Q9HB03 270 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 MSL2Q9HCI7 577 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 PNRC2Q9NPJ4 139 aaKnown RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 MRPL22Q9NWU5 206 aaKnown RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 DCAF16Q9NXF7 216 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 PLEK2Q9NYT0 353 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 TREM2Q9NZC2 230 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 PURGQ9UJV8 347 aaKnown RBP6.63□□□□□ -1.35
CDH3-209ENST00000569080 B9D1Q9UPM9 204 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 WIPI2Q9Y4P8 454 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 CDH10Q9Y6N8 788 aa6.63□□□□□ -1.35
CDH3-209ENST00000569080 TENM1Q9UKZ4 2725 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 A0A1B0GWJ7 208 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 PLSCR5A0PG75 271 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 RNF212BA8MTL3 300 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 CLDN25C9JDP6 229 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 MT-ND5P03915 603 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 HNF1AP20823 631 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 CALB2P22676 271 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 TUBG1P23258 451 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 CRABP1P29762 137 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 GGT2P36268 569 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 LIPAP38571 399 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 ARHGDIAP52565 204 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 SRSF2Q01130 221 aaKnown RBP6.62□□□□□ -1.35
CDH3-209ENST00000569080 CDK5R2Q13319 367 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 MOGQ16653 247 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 ZMAT1Q5H9K5 638 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 PGM2L1Q6PCE3 622 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 DNM1P34Q6PK57 102 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 CORO6Q6QEF8 472 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 FBXW12Q6X9E4 464 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 RINLQ6ZS11 566 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 COLCA1Q6ZS62 124 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 C1orf229Q6ZS94 237 aaPredicted RBP6.62□□□□□ -1.35
CDH3-209ENST00000569080 ARHGAP24Q8N264 748 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 SDR9C7Q8NEX9 313 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 OR10S1Q8NGN2 331 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 OR4K13Q8NH42 304 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 ZNRF4Q8WWF5 429 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 TMEM186Q96B77 213 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 ELMOD3Q96FG2 381 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 SIGLEC11Q96RL6 698 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 COQ7Q99807 217 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 IFT27Q9BW83 186 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 TRIM15Q9C019 465 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 HDHD2Q9H0R4 259 aa6.62□□□□□ -1.35
CDH3-209ENST00000569080 MUC13Q9H3R2 512 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms