RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 IGLV3-21P80748 117 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 MFGE8Q08431 387 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 AIMP2Q13155 320 aaKnown RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 OR7A5Q15622 319 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 RAB30Q15771 203 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 SWI5Q1ZZU3 235 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 CDNFQ49AH0 187 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 SLC18B1Q6NT16 456 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 CD163Q86VB7 1156 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 FJX1Q86VR8 437 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 FAM131CQ96AQ9 280 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 C8orf44Q96CB5 159 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 KTI12Q96EK9 354 aaPredicted RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 ASB16Q96NS5 453 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 CMKLR1Q99788 373 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 GAL3ST1Q99999 423 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 NRIP2Q9BQI9 281 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 ZMAT3Q9HA38 289 aaKnown RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 RCC2Q9P258 522 aaKnown RBP14.08□□□□□ -0.16
COMMD4-215ENST00000566843 MYO9BQ13459 2157 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 REV3LO60673 3130 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 FANCMQ8IYD8 2048 aa14.08□□□□□ -0.16
COMMD4-215ENST00000566843 XIRP2A4UGR9 3374 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 COLCA2A8K830 154 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 EEF1E1-BLOC1S5C9J1V9 151 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 STK17BO94768 372 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 PAX6P26367 422 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 GPR3P46089 330 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 CX3CR1P49238 355 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 SKP2Q13309 424 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 CCL4L1Q8NHW4 92 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 DCUN1D4Q92564 292 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 EGLN1Q9GZT9 426 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 LHX6Q9UPM6 363 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 B9D1Q9UPM9 204 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 FITM1A5D6W6 292 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 ERCC1P07992 297 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 LYL1P12980 280 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 TCEA2Q15560 299 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 CD226Q15762 336 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 SMAD2Q15796 467 aaKnown RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 NNATQ16517 81 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 SLC35D2Q76EJ3 337 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 TDHQ8IZJ6 230 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 ADAD2Q8NCV1 583 aaKnown RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 OR14C36Q8NHC7 312 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 C2CD4CQ8TF44 421 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 OIT3Q8WWZ8 545 aa14.07□□□□□ -0.16
COMMD4-215ENST00000566843 SAT2Q96F10 170 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 RRNAD1Q96FB5 475 aaKnown RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 SLC25A44Q96H78 314 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 GDF2Q9UK05 429 aaPredicted RBP14.07□□□□□ -0.16
COMMD4-215ENST00000566843 C5orf42Q9H799 3197 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 KCNAB3O43448 404 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 SERPINF1P36955 418 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 PTGFRP43088 359 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 CYCSP99999 105 aaKnown RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ECH1Q13011 328 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 HABP2Q14520 560 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 GFOD2Q3B7J2 385 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ZNF776Q68DI1 518 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 OR10K2Q6IF99 312 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 KCTD9Q7L273 389 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TRAPPC6BQ86SZ2 158 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 MISPQ8IVT2 679 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ARHGEF39Q8N4T4 335 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 OR51A2Q8NGJ7 313 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 C16orf52Q8NHV5 167 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ELP5Q8TE02 316 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TMED6Q8WW62 240 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TAAR8Q969N4 342 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TMEM231Q9H6L2 316 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 MRPL22Q9NWU5 206 aaKnown RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 LPAR3Q9UBY5 353 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 RAB22AQ9UL26 194 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TBC1D3DA0A087WVF3 549 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TBC1D3LB9A6J9 549 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 RAB27BO00194 218 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 SRSF10O75494 262 aaKnown RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TBC1D3HP0C7X1 549 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 SMIM6P0DI80 62 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 NFYBP25208 207 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 GJA4P35212 333 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ACTR1BP42025 376 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 CENPAP49450 140 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 RIDAP52758 137 aaKnown RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ACTR1AP61163 376 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 PEA15Q15121 130 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TBC1D3CQ6IPX1 549 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 TBC1D3Q8IZP1 549 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ZSCAN4Q8NAM6 433 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 GATSQ8NAP1 163 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 OR9A4Q8NGU2 314 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 CASTOR1Q8WTX7 329 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ELSPBP1Q96BH3 223 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ZNF524Q96C55 264 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 SMIM8Q96KF7 97 aa14.06□□□□□ -0.16
COMMD4-215ENST00000566843 ELF4Q99607 663 aaPredicted RBP14.06□□□□□ -0.16
COMMD4-215ENST00000566843 KXD1Q9BQD3 176 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms