RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 KLHL28Q9NXS3 571 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 NUP50Q9UKX7 468 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 TMCC3Q9ULS5 477 aa2.02□□□□□ -2.09
PALB2-203ENST00000565038 CDK13Q14004 1512 aaKnown RBP2.01□□□□□ -2.09
PALB2-203ENST00000565038 ARAP3Q8WWN8 1544 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 GOLGA3Q08378 1498 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 ARHGAP35Q9NRY4 1499 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 MAPK8IP3Q9UPT6 1336 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 GLYATL1P3A0A0U1RQE8 302 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 C5orf63A6NC05 138 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 L7N2F9 121 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 CPLX1O14810 134 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 CLPXO76031 633 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 OR8U9P0C7N5 309 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 MCF2P10911 925 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 BST1Q10588 318 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 BST2Q10589 180 aaKnown RBP2.01□□□□□ -2.09
PALB2-203ENST00000565038 CENPPQ6IPU0 288 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 CASC1Q6TDU7 716 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 FAM43BQ6ZT52 329 aaPredicted RBP2.01□□□□□ -2.09
PALB2-203ENST00000565038 SLC16A13Q7RTY0 426 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 KRTAP13-1Q8IUC0 172 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 MIR7-3HGQ8N6C7 128 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 B3GNT7Q8NFL0 401 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 OR6N1Q8NGY5 312 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 OR5B3Q8NH48 314 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 SEH1LQ96EE3 360 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 OR5B12Q96R08 314 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 ZBTB18Q99592 522 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 ATP5SQ99766 215 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 FGF20Q9NP95 211 aaPredicted RBP2.01□□□□□ -2.09
PALB2-203ENST00000565038 TRMT112Q9UI30 125 aaKnown RBP2.01□□□□□ -2.09
PALB2-203ENST00000565038 HYOU1Q9Y4L1 999 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 KIAA0556O60303 1618 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 ZCCHC11Q5TAX3 1644 aaKnown RBP2.01□□□□□ -2.09
PALB2-203ENST00000565038 HECW2Q9P2P5 1572 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 TEX14Q8IWB6 1497 aa2.01□□□□□ -2.09
PALB2-203ENST00000565038 KANK1Q14678 1352 aa2□□□□□ -2.09
PALB2-203ENST00000565038 CUL7Q14999 1698 aa2□□□□□ -2.09
PALB2-203ENST00000565038 IGLV1-36A0A0B4J1U3 117 aa2□□□□□ -2.09
PALB2-203ENST00000565038 IGHV1OR15-9A0A0B4J2B8 117 aa2□□□□□ -2.09
PALB2-203ENST00000565038 ZNF716A6NP11 495 aa2□□□□□ -2.09
PALB2-203ENST00000565038 H0YJW9 148 aa2□□□□□ -2.09
PALB2-203ENST00000565038 UBXN8O00124 270 aa2□□□□□ -2.09
PALB2-203ENST00000565038 MPHOSPH10O00566 681 aaKnown RBP2□□□□□ -2.09
PALB2-203ENST00000565038 SOCS1O15524 211 aa2□□□□□ -2.09
PALB2-203ENST00000565038 CD3GP09693 182 aa2□□□□□ -2.09
PALB2-203ENST00000565038 ZNF735P0CB33 412 aa2□□□□□ -2.09
PALB2-203ENST00000565038 WARSP23381 471 aaKnown RBP2□□□□□ -2.09
PALB2-203ENST00000565038 F2RP25116 425 aa2□□□□□ -2.09
PALB2-203ENST00000565038 CALRP27797 417 aaKnown RBP2□□□□□ -2.09
PALB2-203ENST00000565038 IDI1Q13907 227 aa2□□□□□ -2.09
PALB2-203ENST00000565038 AP1ARQ63HQ0 302 aa2□□□□□ -2.09
PALB2-203ENST00000565038 UNQ9165/PRO28630Q6UXU0 137 aa2□□□□□ -2.09
PALB2-203ENST00000565038 SNX20Q7Z614 316 aa2□□□□□ -2.09
PALB2-203ENST00000565038 NBPF5PQ86XG9 351 aaPredicted RBP2□□□□□ -2.09
PALB2-203ENST00000565038 CDKL3Q8IVW4 592 aaPredicted RBP2□□□□□ -2.09
PALB2-203ENST00000565038 OR13G1Q8NGZ3 307 aa2□□□□□ -2.09
PALB2-203ENST00000565038 CCDC126Q96EE4 140 aa2□□□□□ -2.09
PALB2-203ENST00000565038 GCOM2Q9BZD3 368 aaPredicted RBP2□□□□□ -2.09
PALB2-203ENST00000565038 EDA2RQ9HAV5 297 aa2□□□□□ -2.09
PALB2-203ENST00000565038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2□□□□□ -2.09
PALB2-203ENST00000565038 FANCAO15360 1455 aa2□□□□□ -2.09
PALB2-203ENST00000565038 TNKS1BP1Q9C0C2 1729 aaKnown RBP2□□□□□ -2.09
PALB2-203ENST00000565038 KIR2DS1A0A191URI9 304 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 FAM240BA0A1B0GVZ2 78 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 OR6C74A6NCV1 312 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 RDH16O75452 317 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 CST1P01037 141 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 HLA-DQB1P01920 261 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 CD74P04233 296 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 ZNF43P17038 809 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 GPX4P36969 197 aaPredicted RBP1.99□□□□□ -2.09
PALB2-203ENST00000565038 NSG1P42857 185 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 CDKN2DP55273 166 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 RPL23AP62750 156 aaKnown RBP1.99□□□□□ -2.09
PALB2-203ENST00000565038 KIR2DS1Q14954 304 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 ZMYND11Q15326 602 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 Q6ZSR3 168 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 RUFY3Q7L099 469 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 ARL6IP6Q8N6S5 226 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 FBXL13Q8NEE6 735 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 OR9A2Q8NGT5 310 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 LRRC29Q8WV35 223 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 SHC3Q92529 594 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 PTX4Q96A99 478 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 SLC25A46Q96AG3 418 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 GALNT14Q96FL9 552 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 DUS3LQ96G46 650 aaKnown RBP1.99□□□□□ -2.09
PALB2-203ENST00000565038 TBL1YQ9BQ87 522 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 FGF23Q9GZV9 251 aaPredicted RBP1.99□□□□□ -2.09
PALB2-203ENST00000565038 CSDC2Q9Y534 153 aaKnown RBP1.99□□□□□ -2.09
PALB2-203ENST00000565038 NEO1Q92859 1461 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 TROQ12816 1431 aaPredicted RBP1.99□□□□□ -2.09
PALB2-203ENST00000565038 HECW1Q76N89 1606 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 MAP3K4Q9Y6R4 1608 aa1.99□□□□□ -2.09
PALB2-203ENST00000565038 CCNB3Q8WWL7 1395 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.98□□□□□ -2.09
PALB2-203ENST00000565038 SIGLEC1Q9BZZ2 1709 aa1.98□□□□□ -2.09
PALB2-203ENST00000565038 IGKV3D-11A0A0A0MRZ8 115 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms