RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-210	ENST00000564587	HIST2H3A	Q71DI3	136 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	SPATC1	Q76KD6	591 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	SYT9	Q86SS6	491 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	OR13C5	Q8NGS8	318 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	ABHD3	Q8WU67	409 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	SARAF	Q96BY9	339 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	SLCO5A1	Q9H2Y9	848 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	ZCCHC4	Q9H5U6	513 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	TCF7L1	Q9HCS4	588 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	NOX4	Q9NPH5	578 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	GLRX2	Q9NS18	164 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	ASH2L	Q9UBL3	628 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	OR52A1	Q9UKL2	312 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	WASF3	Q9UPY6	502 aa		13.74	□□□□□ -0.21
COMMD4-210	ENST00000564587	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	TRBV5-7	A0A0A0MS05	114 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	SHISA3	A0PJX4	238 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	MKRN2OS	H3BPM6	223 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	RRP8	O43159	456 aa	Known RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	KRT33A	O76009	404 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	ITGB2	P05107	769 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	PTBP1	P26599	531 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	APEX1	P27695	318 aa	Known RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	PSMA6	P60900	246 aa	Known RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	PCBD1	P61457	104 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	ECH1	Q13011	328 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	BCL2L15	Q5TBC7	163 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	OTP	Q5XKR4	325 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	RPUSD3	Q6P087	351 aa	Known RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	SFXN4	Q6P4A7	337 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	CORO6	Q6QEF8	472 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	IL17RD	Q8NFM7	739 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	RGP1	Q92546	391 aa	Predicted RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	NABP1	Q96AH0	204 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	ATF6B	Q99941	703 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	ZNF416	Q9BWM5	594 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	PRDM14	Q9GZV8	571 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	PPIL3	Q9H2H8	161 aa	Known RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	SLC24A3	Q9HC58	644 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	DDX28	Q9NUL7	540 aa	Known RBP	13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	TMEM38B	Q9NVV0	291 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	ABRACL	Q9P1F3	81 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	HHLA2	Q9UM44	414 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	GTF2A1L	Q9UNN4	478 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	CAMK2A	Q9UQM7	478 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	EMC9	Q9Y3B6	208 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	CSAG2	Q9Y5P2	127 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	LIPG	Q9Y5X9	500 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	CACNA1C	Q13936	2221 aa		13.73	□□□□□ -0.21
COMMD4-210	ENST00000564587	RPL36A-HNRNPH2	H7BZ11	118 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	FARS2	O95363	451 aa	Known RBP	13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	PNP	P00491	289 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	ZNF12	P17014	697 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	SCRN3	Q0VDG4	424 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	ENDOG	Q14249	297 aa	Known RBP	13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	FAM27D1	Q5T7N8	215 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	CFAP77	Q6ZQR2	320 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587		Q6ZS92	163 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	ELMOD2	Q8IZ81	293 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	FNDC9	Q8TBE3	224 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	TSEN15	Q8WW01	171 aa	Known RBP	13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	CMTM3	Q96MX0	182 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	KCNJ15	Q99712	375 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	CCDC32	Q9BV29	185 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	CRLF2	Q9HC73	371 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	GPR35	Q9HC97	309 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	G6PC2	Q9NQR9	355 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	FAM206A	Q9NX38	181 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	SPRR3	Q9UBC9	169 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	NUFIP1	Q9UHK0	495 aa	Known RBP	13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	DHDH	Q9UQ10	334 aa		13.72	□□□□□ -0.21
COMMD4-210	ENST00000564587	SLC22A20	A6NK97	555 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	TTLL8	A6PVC2	850 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587		J3QRK9	145 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	DVL2	O14641	736 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	PIN1P1	O15428	100 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	RANBP1	P43487	201 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	MFGE8	Q08431	387 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	ZNF181	Q2M3W8	571 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	ELFN2	Q5R3F8	820 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	IDNK	Q5T6J7	187 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	SPACA3	Q8IXA5	215 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	PARP16	Q8N5Y8	322 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	CCDC54	Q8NEL0	328 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	OR10S1	Q8NGN2	331 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	TMEM106A	Q96A25	262 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	APH1A	Q96BI3	265 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	ZNF775	Q96BV0	537 aa	Predicted RBP	13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	FOXB1	Q99853	325 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	HDHD2	Q9H0R4	259 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	SP140L	Q9H930	580 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	ABCB9	Q9NP78	766 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	PNRC2	Q9NPJ4	139 aa	Known RBP	13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	PLSCR2	Q9NRY7	297 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	COMMD3	Q9UBI1	195 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	CKLF	Q9UBR5	152 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	FOXJ3	Q9UPW0	622 aa		13.71	□□□□□ -0.21
COMMD4-210	ENST00000564587	SLC22A13	Q9Y226	551 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms