RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 OSBPL10Q9BXB5 764 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 POLDIP3Q9BY77 421 aaKnown RBP4.48□□□□□ -1.69
CNOT1-205ENST00000563283 PLA2G12AQ9BZM1 189 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 OPN3Q9H1Y3 402 aaPredicted RBP4.48□□□□□ -1.69
CNOT1-205ENST00000563283 OR52D1Q9H346 318 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 KCNJ16Q9NPI9 418 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 PLSCR4Q9NRQ2 329 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 MED29Q9NX70 200 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 TAS2R5Q9NYW4 299 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 COQ3Q9NZJ6 369 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 KLHL9Q9P2J3 617 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 B3GAT1Q9P2W7 334 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 RASD1Q9Y272 281 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 SIGLEC7Q9Y286 467 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 POFUT2Q9Y2G5 429 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 ADAM18Q9Y3Q7 739 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 CDH10Q9Y6N8 788 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 ZNF469Q96JG9 3925 aaPredicted RBP4.48□□□□□ -1.69
CNOT1-205ENST00000563283 HIVEP1P15822 2718 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 NOTCH2Q04721 2471 aa4.48□□□□□ -1.69
CNOT1-205ENST00000563283 ANKRD17O75179 2603 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ALPK2Q86TB3 2170 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 IGKV3D-15A0A087WSY6 115 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 TEX13CA0A0J9YWL9 993 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ZNF726A6NNF4 738 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ZNF724A8MTY0 619 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 H7C1C5 153 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 AP4M1O00189 453 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 GPR171O14626 319 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CASQ2O14958 399 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 TRAF3IP2O43734 574 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 PTP4A3O75365 173 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SNAP29O95721 258 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 BCL10O95999 233 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 IGHV3-9P01782 118 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 YES1P07947 543 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CD14P08571 375 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CDH2P19022 906 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 LOXP28300 417 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 AGTR1P30556 359 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CCKARP32238 428 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ACVR1BP36896 505 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 PTDSS1P48651 473 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 DAP3P51398 398 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 RAD23AP54725 363 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 FOXG1P55316 489 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 BIDP55957 195 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CLDN17P56750 224 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 FXYD6P3P58550 94 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 PRPS1P60891 318 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 LCN6P62502 163 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ZP4Q12836 540 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 KRR1Q13601 381 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 GINS1Q14691 196 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SLC17A1Q14916 467 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 PDK3Q15120 406 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SNCBQ16143 134 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ACKR1Q16570 336 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 RFX4Q33E94 735 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SLC25A35Q3KQZ1 300 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ANKDD1AQ495B1 522 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 OGFRL1Q5TC84 451 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 KDM4DQ6B0I6 523 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 RPL13AP3Q6NVV1 102 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 NIPAL3Q6P499 406 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 MEX3BQ6ZN04 569 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 DPY19L2P2Q6ZN68 376 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CREB3L2Q70SY1 520 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 AAED1Q7RTV5 226 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 PXKQ7Z7A4 578 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 LUZP2Q86TE4 346 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 TUSC5Q8IXB3 177 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ZNF100Q8IYN0 542 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SPARTQ8N0X7 666 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 GABRG1Q8N1C3 465 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 PARP8Q8N3A8 854 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 CLDN22Q8N7P3 220 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 LRRC75AQ8NAA5 344 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 OR2T33Q8NG76 320 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 OR4Q3Q8NH05 313 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 LINC01560Q8TB33 94 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 NRGNQ92686 78 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 RNASE6Q93091 150 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 RASD2Q96D21 266 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 GMPPAQ96IJ6 420 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 TXNDC15Q96J42 360 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 Q96M85 177 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ZNF570Q96NI8 536 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ERMAPQ96PL5 475 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 TSPAN32Q96QS1 320 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 EMC6Q9BV81 110 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SF3B5Q9BWJ5 86 aaKnown RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 TEX12Q9BXU0 123 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 VCXQ9H320 206 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 VCX3BQ9H321 246 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 SMPD3Q9NY59 655 aaPredicted RBP4.47□□□□□ -1.69
CNOT1-205ENST00000563283 USE1Q9NZ43 259 aa4.47□□□□□ -1.69
CNOT1-205ENST00000563283 ENOPH1Q9UHY7 261 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms