RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 ABHD5Q8WTS1 349 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 RGP1Q92546 391 aaPredicted RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 RERGQ96A58 199 aaPredicted RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 FAM46AQ96IP4 442 aaKnown RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 GUCD1Q96NT3 240 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 DUX5Q96PT3 197 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 ZNF471Q9BX82 626 aaPredicted RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 MRPS18AQ9NVS2 196 aaKnown RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 COPS7AQ9UBW8 275 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 JPT1Q9UK76 154 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 ARL5CA6NH57 179 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 TNFSF15O95150 251 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 FPR1P21462 350 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 BMP5P22003 454 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 FBLP22087 321 aaKnown RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 SLC6A11P48066 632 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 CAV3P56539 151 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 ERVPABLB-1P60509 514 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 KLF1Q13351 362 aaPredicted RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 MAPK14Q16539 360 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 HLA-BQ31612 363 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 CAPN13Q6MZZ7 669 aaPredicted RBP8.47□□□□□ -1.05
CDH1-205ENST00000562836 C19orf48Q6RUI8 117 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 DEFB128Q7Z7B8 93 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 TMEM179BQ7Z7N9 219 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 FRZBQ92765 325 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 SULT4A1Q9BR01 284 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 TMEM39BQ9GZU3 492 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 ZBP1Q9H171 429 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 MMP26Q9NRE1 261 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 TOGARAM1Q9Y4F4 1720 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 LAMB1P07942 1786 aa8.47□□□□□ -1.05
CDH1-205ENST00000562836 UNC119BA6NIH7 251 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 RNF212BA8MTL3 300 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 C9JQL5 133 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 K7EPK0 472 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 TRAPPC6AO75865 159 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 S1PR2O95136 353 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 ZNF205O95201 554 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.05
CDH1-205ENST00000562836 GSK3BP49841 420 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 OR4D2P58180 307 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 NTHL1P78549 312 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 FABP5Q01469 135 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.46□□□□□ -1.05
CDH1-205ENST00000562836 C9orf50Q5SZB4 431 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 WDR74Q6RFH5 385 aaPredicted RBP8.46□□□□□ -1.05
CDH1-205ENST00000562836 LYPD4Q6UWN0 246 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 HACD2Q6Y1H2 254 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 MUC15Q8N387 334 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 FAM71E2Q8N5Q1 922 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 OR4K5Q8NGD3 323 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 GINS3Q9BRX5 216 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 LYRM4Q9HD34 91 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 SERHLQ9NQF3 203 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 SLC9A2Q9UBY0 812 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 VPREB3Q9UKI3 123 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 NXT1Q9UKK6 140 aaKnown RBP8.46□□□□□ -1.05
CDH1-205ENST00000562836 SLC17A4Q9Y2C5 497 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 ZNF337Q9Y3M9 751 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 ATAD5Q96QE3 1844 aa8.46□□□□□ -1.05
CDH1-205ENST00000562836 C10orf71Q711Q0 1435 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZNF705FA8MVS1 300 aaPredicted RBP8.46□□□□□ -1.06
CDH1-205ENST00000562836 DBHP09172 617 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 SLC35G6P0C7Q6 338 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZNF705DP0CH99 300 aaPredicted RBP8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZNF705BP0CI00 300 aaPredicted RBP8.46□□□□□ -1.06
CDH1-205ENST00000562836 ESDP10768 282 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 TPSB2P20231 275 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 BDKRB1P46663 353 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 CLDN12P56749 244 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 C1QTNF8P60827 252 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZFP36L1Q07352 338 aaKnown RBP8.46□□□□□ -1.06
CDH1-205ENST00000562836 P2RY6Q15077 328 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 TPSAB1Q15661 275 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 GCSAMLQ5JQS6 135 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 CTSL3PQ5NE16 218 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 PRR31Q5SQ13 230 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 C9orf135Q5VTT2 229 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 GDF7Q7Z4P5 450 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 OAFQ86UD1 273 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 GPSM1Q86YR5 675 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZNF440Q8IYI8 595 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZNF567Q8N184 647 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 PGBD5Q8N414 524 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 NHLRC2Q8NBF2 726 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 OR52L1Q8NGH7 329 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 MRAP2Q96G30 205 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 TRIB3Q96RU7 358 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 TRIB1Q96RU8 372 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 ZNF358Q9NW07 568 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 OSER1Q9NX31 292 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 THYN1Q9P016 225 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 PSORS1C1Q9UIG5 152 aa8.46□□□□□ -1.06
CDH1-205ENST00000562836 COL1A1P02452 1464 aaPredicted RBP8.46□□□□□ -1.06
CDH1-205ENST00000562836 NPIPA5A0A0B4J1W7 369 aa8.45□□□□□ -1.06
CDH1-205ENST00000562836 FAM230AA0A1W2PPH8 454 aa8.45□□□□□ -1.06
CDH1-205ENST00000562836 KNG1P01042 644 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms