RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 CDH9Q9ULB4 789 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 NPIPA1Q9UND3 350 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 RPH3ALQ9UNE2 315 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 PACSIN2Q9UNF0 486 aaPredicted RBP1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 FLVCR2Q9UPI3 526 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 ERVW-1Q9UQF0 538 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 CBY1Q9Y3M2 126 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 NPTNQ9Y639 398 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 PDCD11Q14690 1871 aaKnown RBP1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 CACNA1BQ00975 2339 aa1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 SF3B1O75533 1304 aaKnown RBP eCLIP1.85□□□□□ -2.11
HDGFL3-202ENST00000562702 PATJQ8NI35 1801 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 MAP1BP46821 2468 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 NACAE9PAV3 2078 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CFAP54Q96N23 3096 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 EP300Q09472 2414 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 IGLV4-60A0A075B6I1 120 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 IGHV1OR21-1A0A087WYE8 117 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 IGHV3-64DA0A0J9YX35 117 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 A0A0J9YYE9 177 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 RAB19A4D1S5 217 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 OR52A4PA6NMU1 304 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 A8MXQ7 604 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 DNALI1O14645 258 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TRDMT1O14717 391 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SULT1B1O43704 296 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 FCMRO60667 390 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 N4BP1O75113 896 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 BCAS1O75363 584 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TRBC1P01850 177 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 FTH1P02794 183 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 LGALS2P05162 132 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 PNMA6AP0CW24 399 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 PNMTP11086 282 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 POU2F1P14859 743 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 HPGDP15428 266 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 ZNF24P17028 368 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 MAGP20916 626 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 ATP6V1B2P21281 511 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 MSNP26038 577 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CHMLP26374 656 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 HMOX2P30519 316 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 RRM2P31350 389 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SHMT2P34897 504 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 HPCAL1P37235 193 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 GRIA1P42261 906 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CDKN1BP46527 198 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 RFX3P48380 749 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 RGS4P49798 205 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 DAP3P51398 398 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TNNC1P63316 161 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TGM3Q08188 693 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SELPLGQ14242 412 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CHRNA6Q15825 494 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 NSUN5P1Q3KNT7 163 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 NKAIN1Q4KMZ8 207 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 LIN9Q5TKA1 542 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 PTRHD1Q6GMV3 140 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 ZSCAN25Q6NSZ9 544 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 FAM71F2Q6NXP2 309 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 Q6ZPB1 254 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SNX20Q7Z614 316 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 MOB3BQ86TA1 216 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 KATNAL2Q8IYT4 538 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 FTMTQ8N4E7 242 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CSGALNACT2Q8N6G5 542 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 ATP6V0D2Q8N8Y2 350 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 VN1R2Q8NFZ6 395 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 OR10G3Q8NGC4 313 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 OR5T3Q8NGG3 340 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 FANK1Q8TC84 345 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CD300LFQ8TDQ1 290 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SPRYD4Q8WW59 207 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 MAIP1Q8WWC4 291 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 ASZ1Q8WWH4 475 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 NT5C3BQ969T7 300 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 KIAA1143Q96AT1 154 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CCDC124Q96CT7 223 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 RNF185Q96GF1 192 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 PRRC1Q96M27 445 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TAAR1Q96RJ0 339 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 CYTH2Q99418 400 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 DNTTIP1Q9H147 329 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 VCX3BQ9H321 246 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TMEM185BQ9H7F4 350 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 AUNIPQ9H7T9 357 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SPACA1Q9HBV2 294 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 EML4Q9HC35 981 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TREM1Q9NP99 234 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 C20orf96Q9NUD7 363 aaPredicted RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 GCNT4Q9P109 453 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 PEF1Q9UBV8 284 aaKnown RBP1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 TP53TG5Q9Y2B4 290 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 SPAG17Q6Q759 2223 aa1.84□□□□□ -2.11
HDGFL3-202ENST00000562702 MROH7Q68CQ1 1323 aa1.84□□□□□ -2.12
HDGFL3-202ENST00000562702 XIRP2A4UGR9 3374 aa1.84□□□□□ -2.12
HDGFL3-202ENST00000562702 CEP250Q9BV73 2442 aa1.83□□□□□ -2.12
HDGFL3-202ENST00000562702 VWA8A3KMH1 1905 aa1.83□□□□□ -2.12
HDGFL3-202ENST00000562702 TICRRQ7Z2Z1 1910 aa1.83□□□□□ -2.12
HDGFL3-202ENST00000562702 CEP192Q8TEP8 1941 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms