RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 MBD3L4A6NDZ8 208 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 MBD3L3A6NE82 208 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 MBD3L5A6NJ08 208 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 OR4C45A6NMZ5 311 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 LOC110117498-PIK3R3F6TDL0 507 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 SRSF10O75494 262 aaKnown RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 SC5DO75845 299 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ARL6IP5O75915 188 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ZFPL1O95159 310 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 CNOT4O95628 575 aaKnown RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 WNT11O96014 354 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 APOC1P02654 83 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 CRHP06850 196 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 CD8BP10966 210 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 SFTPCP11686 197 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 B4GALT1P15291 398 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 MYL9P24844 172 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 HSD11B1P28845 292 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 MMP16P51512 607 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 TDGF1P3P51864 188 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 PSMA6P60900 246 aaKnown RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ECH1Q13011 328 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 RAB35Q15286 201 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 C1orf185Q5T7R7 199 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 FBXW9Q5XUX1 488 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF585AQ6P3V2 769 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF813Q6ZN06 617 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 TMEM91Q6ZNR0 172 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 LINC00299Q6ZSB3 139 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 FAM214BQ7L5A3 538 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 DPPA2Q7Z7J5 298 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 CATSPERDQ86XM0 798 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 UBE2J2Q8N2K1 259 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 SLC22A24Q8N4F4 322 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF676Q8N7Q3 588 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 TEX19Q8NA77 164 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 OR10S1Q8NGN2 331 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 OR6K3Q8NGY3 331 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 MBD3L2Q8NHZ7 208 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 FAM57AQ8TBR7 257 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 HSD17B8Q92506 261 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF837Q96EG3 531 aaPredicted RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 DACH2Q96NX9 599 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 SLX1AQ9BQ83 275 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 HDHD2Q9H0R4 259 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 RNF167Q9H6Y7 350 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 PNRC2Q9NPJ4 139 aaKnown RBP12.56□□□□□ -0.4
COMMD4-205ENST00000562310 FRRS1LQ9P0K9 344 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 A3GALT2U3KPV4 340 aa12.56□□□□□ -0.4
COMMD4-205ENST00000562310 ACOD1A6NK06 481 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF879B4DU55 563 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 RER1O15258 196 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 LRRTM2O43300 516 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 CLPXO76031 633 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 WISP2O76076 250 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 TPOP07202 933 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 UBCP0CG48 685 aaKnown RBP12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ABOP16442 354 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 TGFBR1P36897 503 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 KIR3DL2P43630 455 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 MTNR1BP49286 362 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ACSM3Q53FZ2 586 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 WDR38Q5JTN6 314 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ELFN2Q5R3F8 820 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 BCL2L15Q5TBC7 163 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF704Q6ZNC4 412 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-205ENST00000562310 SLC16A14Q7RTX9 510 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.55□□□□□ -0.4
COMMD4-205ENST00000562310 CEACAM19Q7Z692 300 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 PRSS35Q8N3Z0 413 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 C9orf106Q8NAJ2 232 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 KDF1Q8NAX2 398 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ATF6BQ99941 703 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 PRORYQ9H606 182 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 ATPIF1Q9UII2 106 aa12.55□□□□□ -0.4
COMMD4-205ENST00000562310 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
COMMD4-205ENST00000562310 CACNA1CQ13936 2221 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 TRBV5-5A0A0J9YX44 114 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 TMEM269A0A1B0GVZ9 245 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 SGCEO43556 437 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 IGHV3-9P01782 118 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 UCHL1P09936 223 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 CTSSP25774 331 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 MPGP29372 298 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 RPS11P62280 158 aaKnown RBP eCLIP12.54□□□□□ -0.4
COMMD4-205ENST00000562310 ARF1P84077 181 aaKnown RBP12.54□□□□□ -0.4
COMMD4-205ENST00000562310 MFGE8Q08431 387 aaPredicted RBP12.54□□□□□ -0.4
COMMD4-205ENST00000562310 GTF3C1Q12789 2109 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 KLRB1Q12918 225 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 SLC36A2Q495M3 483 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 Q499Y3 187 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 ZMAT1Q5H9K5 638 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 UNQ9370/PRO34162Q6UXP9 181 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 TFAP2EQ6VUC0 442 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 CD163Q86VB7 1156 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 TPRA1Q86W33 373 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 LRRC18Q8N456 261 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 CISD2Q8N5K1 135 aaKnown RBP12.54□□□□□ -0.4
COMMD4-205ENST00000562310 IL17RDQ8NFM7 739 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms