RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CAPZA2P47755 286 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ACTA2P62736 377 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ACTG2P63267 376 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 TUBA1BP68363 451 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 TUBA4AP68366 448 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 PSG4Q00888 419 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ROM1Q03395 351 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 TBCEQ15813 527 aaPredicted RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 GSG1Q2KHT4 349 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 CCDC92Q53HC0 331 aaPredicted RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ELFN2Q5R3F8 820 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 TMEM53Q6P2H8 277 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 TMEM154Q6P9G4 183 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 KCTD18Q6PI47 426 aaPredicted RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 TUBA1AQ71U36 451 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 RHOUQ7L0Q8 258 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 VASH1Q7L8A9 365 aaPredicted RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 MDP1Q86V88 176 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 SPARTQ8N0X7 666 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 SVOPQ8N4V2 548 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 OR52N1Q8NH53 320 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 LRRC46Q96FV0 321 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 MRPL48Q96GC5 212 aaKnown RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ZNF75AQ96N20 296 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 OR8B4Q96RC9 309 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 USB1Q9BQ65 265 aaKnown RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ACTR6Q9GZN1 396 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 HDHD2Q9H0R4 259 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 DDX28Q9NUL7 540 aaKnown RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 CHCHD3Q9NX63 227 aaKnown RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 ATPIF1Q9UII2 106 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 CAB39Q9Y376 341 aaPredicted RBP11.04□□□□□ -0.64
CMTM4-203ENST00000561680 SNX5Q9Y5X3 404 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 DOPEY1Q5JWR5 2465 aa11.04□□□□□ -0.64
CMTM4-203ENST00000561680 A0A1W2PR80 420 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 OR6C6A6NF89 314 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 MYL12BO14950 172 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 SULT1C4O75897 302 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 PTHP01270 115 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 PLA2G2AP14555 144 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 PCMT1P22061 227 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 OPRL1P41146 370 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 RAB1AP62820 205 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 SORDQ00796 357 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 PABPC1L2AQ5JQF8 200 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 ZNF774Q6NX45 483 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 LRRN1Q6UXK5 716 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 PLEKHG7Q6ZR37 379 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 EGFL6Q8IUX8 553 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 ZNF679Q8IYX0 411 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 SYS1Q8N2H4 156 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 KLHL36Q8N4N3 616 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 NANOGP1Q8N7R0 232 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 ZNF485Q8NCK3 441 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 AKR7LQ8NHP1 331 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 SNX33Q8WV41 574 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 MYCBPQ99417 103 aaPredicted RBP11.03□□□□□ -0.64
CMTM4-203ENST00000561680 COQ7Q99807 217 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 ATF6BQ99941 703 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 MND1Q9BWT6 205 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 RNF121Q9H920 327 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 SLCO1C1Q9NYB5 712 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 PLEK2Q9NYT0 353 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 MRM2Q9UI43 246 aaKnown RBP11.03□□□□□ -0.64
CMTM4-203ENST00000561680 ERGIC3Q9Y282 383 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 LSM2Q9Y333 95 aaKnown RBP11.03□□□□□ -0.64
CMTM4-203ENST00000561680 LRP12Q9Y561 859 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 FLNCQ14315 2725 aa11.03□□□□□ -0.64
CMTM4-203ENST00000561680 ADGRG4Q8IZF6 3080 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 METTL15A6NJ78 407 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 PSMD9O00233 223 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 MAGEB4O15481 346 aaPredicted RBP11.02□□□□□ -0.65
CMTM4-203ENST00000561680 IGKV3-15P01624 115 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 KRT8P05787 483 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 COX5BP10606 129 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 CBR1P16152 277 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 PPP3CBP16298 524 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 ZNF14P17017 642 aaPredicted RBP11.02□□□□□ -0.65
CMTM4-203ENST00000561680 CRYGSP22914 178 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 PAX7P23759 505 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 GRNP28799 593 aaKnown RBP11.02□□□□□ -0.65
CMTM4-203ENST00000561680 OTX1P32242 354 aaPredicted RBP11.02□□□□□ -0.65
CMTM4-203ENST00000561680 MAP2K4P45985 399 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 WNT4P56705 351 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 OR12D2P58182 307 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 GRB2P62993 217 aaKnown RBP11.02□□□□□ -0.65
CMTM4-203ENST00000561680 EMX1Q04741 257 aaPredicted RBP11.02□□□□□ -0.65
CMTM4-203ENST00000561680 ECH1Q13011 328 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 TAB1Q15750 504 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 KRTAP27-1Q3LI81 207 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 TP53I3Q53FA7 332 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 OR2G6Q5TZ20 316 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 DEGS2Q6QHC5 323 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 SEZ6L2Q6UXD5 910 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 TMPRSS11AQ6ZMR5 421 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 SPATC1Q76KD6 591 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 KCTD20Q7Z5Y7 419 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 KRT77Q7Z794 578 aa11.02□□□□□ -0.65
CMTM4-203ENST00000561680 ZNF584Q8IVC4 421 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms