RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 TAS2R16Q9NYV7 291 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 ZNF224Q9NZL3 707 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 H2AFY2Q9P0M6 372 aaPredicted RBP4.78□□□□□ -1.64
ZEB1-220ENST00000560909 ATPIF1Q9UII2 106 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 ERRFI1Q9UJM3 462 aaPredicted RBP4.78□□□□□ -1.64
ZEB1-220ENST00000560909 DIMT1Q9UNQ2 313 aaKnown RBP4.78□□□□□ -1.64
ZEB1-220ENST00000560909 TPRKBQ9Y3C4 175 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 LHFPL6Q9Y693 200 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 COMMD3-BMI1R4GMX3 469 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 U3KQE9 123 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 PRR14LQ5THK1 2151 aa4.78□□□□□ -1.64
ZEB1-220ENST00000560909 ARHGAP21Q5T5U3 1957 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 FAM171A2A8MVW0 826 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF593O00488 134 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 LRRTM2O43300 516 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SULT1C4O75897 302 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 MPZL1O95297 269 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ABHD16AO95870 558 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 IGLV1-44P01699 117 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 IGHV3-9P01782 118 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CDK1P06493 297 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 LIMS3P0CW19 117 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 LIMS4P0CW20 117 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 OR8G3PP0DMU2 310 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 COX5BP10606 129 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 OTX1P32242 354 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CDAP32320 146 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 DCTDP32321 178 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CD79BP40259 229 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ENTPD1P49961 510 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ASCL1P50553 236 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 NUDT6P53370 316 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ACTC1P68032 377 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ACTA1P68133 377 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SIRPAP78324 504 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 TGFBR3Q03167 851 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF85Q03923 595 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SRSF1Q07955 248 aaKnown RBP eCLIP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ST3GAL4Q11206 333 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 FAPQ12884 760 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RSPO1Q2MKA7 263 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 OR7E24Q6IFN5 339 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 B3GLCTQ6Y288 498 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF813Q6ZN06 617 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 NCCRP1Q6ZVX7 275 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SHFQ7M4L6 423 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 PRSS48Q7RTY5 328 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SKA3Q8IX90 412 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SYS1Q8N2H4 156 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF808Q8N4W9 903 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ACBD7Q8N6N7 88 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CNEP1R1Q8N9A8 125 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 BPIFB6Q8NFQ5 453 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 STEAP2Q8NFT2 490 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 OR4F15Q8NGB8 312 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 OR10S1Q8NGN2 331 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 FGFBP3Q8TAT2 258 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RPS4Y2Q8TD47 263 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RNF133Q8WVZ7 376 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ITLN2Q8WWU7 325 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SGCDQ92629 289 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 NSMAFQ92636 917 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RNASE6Q93091 150 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 FBXO17Q96EF6 278 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RNFT2Q96EX2 444 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 MAP6Q96JE9 813 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ALKBH3Q96Q83 286 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 INTS14Q96SY0 518 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CNN2Q99439 309 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RHNO1Q9BSD3 238 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF416Q9BWM5 594 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 RBM24Q9BX46 236 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 MOV10Q9HCE1 1003 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 AMBNQ9NP70 447 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CCNB1IP1Q9NPC3 277 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 PNRC2Q9NPJ4 139 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SLC17A5Q9NRA2 495 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 DDX28Q9NUL7 540 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 SCN3BQ9NY72 215 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CRNNQ9UBG3 495 aaPredicted RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 UPB1Q9UBR1 384 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 BLOC1S6Q9UL45 172 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 LSM2Q9Y333 95 aaKnown RBP4.77□□□□□ -1.65
ZEB1-220ENST00000560909 TMEM14AQ9Y6G1 99 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 CADP27708 2225 aa4.77□□□□□ -1.65
ZEB1-220ENST00000560909 ABCA4P78363 2273 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 A0A1W2PQL4 384 aaPredicted RBP4.76□□□□□ -1.65
ZEB1-220ENST00000560909 TMEM129A0AVI4 362 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 OR6C6A6NF89 314 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 TVP23AA6NH52 213 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 OR5H1A6NKK0 313 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 C12orf71A8MTZ7 269 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 PRR32B1ATL7 298 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 C16orf97H3BN30 126 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 PHYHO14832 338 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 SYNGR3O43761 229 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 SELENOFO60613 162 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 TMCC2O75069 709 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 ZNF254O75437 659 aa4.76□□□□□ -1.65
ZEB1-220ENST00000560909 KRT33AO76009 404 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms