RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 IGLV3-12A0A075B6K2 115 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 A6NDN8 102 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 SCAMP2O15127 329 aaKnown RBP2.81□□□□□ -1.96
HMG20A-211ENST00000560867 H6PDO95479 791 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 FTH1P02794 183 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 SERPINE2P07093 398 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 ANXA5P08758 320 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 ERGP11308 486 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 PBLDP30039 288 aaPredicted RBP2.81□□□□□ -1.96
HMG20A-211ENST00000560867 CEACAM3P40198 252 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 OPRK1P41145 380 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 CXCL12P48061 93 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 HCAR3P49019 387 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 P2RX1P51575 399 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 CCNA1P78396 465 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 CARD17Q5XLA6 110 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 REEP3Q6NUK4 255 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 PRMT9Q6P2P2 845 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 PLET1Q6UQ28 207 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 ZYG11AQ6WRX3 759 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 PP632Q6XCG6 107 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 CDKL3Q8IVW4 592 aaPredicted RBP2.81□□□□□ -1.96
HMG20A-211ENST00000560867 METTL13Q8N6R0 699 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 PRELID2Q8N945 189 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 ZNF721Q8TF20 911 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 ESR2Q92731 530 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 TIMM17AQ99595 171 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 ZNF2Q9BSG1 426 aaPredicted RBP2.81□□□□□ -1.96
HMG20A-211ENST00000560867 COL1A2P08123 1366 aa2.81□□□□□ -1.96
HMG20A-211ENST00000560867 COL22A1Q8NFW1 1626 aaPredicted RBP2.8□□□□□ -1.96
HMG20A-211ENST00000560867 DNASE2O00115 360 aaPredicted RBP2.8□□□□□ -1.96
HMG20A-211ENST00000560867 RNF13O43567 381 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 FOXH1O75593 365 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 SEMA3DO95025 777 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 HLA-DQA1P01909 254 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 CTSLP07711 333 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 ACSM4P0C7M7 580 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 ATF6P18850 670 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 MRPL19P49406 292 aaKnown RBP2.8□□□□□ -1.96
HMG20A-211ENST00000560867 SP4Q02446 784 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 KIR2DS1Q14954 304 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 TCEAL5Q5H9L2 206 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 PPM1LQ5SGD2 360 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 H3F3CQ6NXT2 135 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 CENPQQ7L2Z9 268 aaPredicted RBP2.8□□□□□ -1.96
HMG20A-211ENST00000560867 CMC1Q7Z7K0 106 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 SCD5Q86SK9 330 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 LGI3Q8N145 548 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 NECAP1Q8NC96 275 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 OR9A2Q8NGT5 310 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 OR8U1Q8NH10 309 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 LILRB4Q8NHJ6 448 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 RNF139Q8WU17 664 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 TCEAL3Q969E4 200 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 FLYWCH2Q96CP2 140 aaKnown RBP2.8□□□□□ -1.96
HMG20A-211ENST00000560867 RNF5Q99942 180 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 KRTAP4-3Q9BYR4 195 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 SPNS1Q9H2V7 528 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 PCM1Q15154 2024 aa2.8□□□□□ -1.96
HMG20A-211ENST00000560867 IGLV1-36A0A0B4J1U3 117 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 ZNF850A8MQ14 1090 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 SGK1O00141 431 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 CDC40O60508 579 aaKnown RBP eCLIP2.79□□□□□ -1.96
HMG20A-211ENST00000560867 FGFR1OPO95684 399 aaKnown RBP2.79□□□□□ -1.96
HMG20A-211ENST00000560867 PPP1CBP62140 327 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 IFT88Q13099 833 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 SRSF5Q13243 272 aaKnown RBP2.79□□□□□ -1.96
HMG20A-211ENST00000560867 DNAJC24Q6P3W2 148 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 NPSR1Q6W5P4 371 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 SNX20Q7Z614 316 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 NPWQ8N729 165 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 CHST4Q8NCG5 386 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 PTX4Q96A99 478 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 MCUR1Q96AQ8 359 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 SULT4A1Q9BR01 284 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 RTBDNQ9BSG5 229 aaPredicted RBP2.79□□□□□ -1.96
HMG20A-211ENST00000560867 ANKRD60Q9BZ19 345 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 MARCOQ9UEW3 520 aaPredicted RBP2.79□□□□□ -1.96
HMG20A-211ENST00000560867 S4R3C0 116 aa2.79□□□□□ -1.96
HMG20A-211ENST00000560867 SMKR1H3BMG3 65 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 AP3B1O00203 1094 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 RAD51CO43502 376 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 EIF4E2O60573 245 aaKnown RBP2.78□□□□□ -1.96
HMG20A-211ENST00000560867 CLDN11O75508 207 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 CCNE2O96020 404 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 ARG1P05089 322 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 DCNP07585 359 aaKnown RBP2.78□□□□□ -1.96
HMG20A-211ENST00000560867 IL1RNP18510 177 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 HSDL1Q3SXM5 330 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 KRTAP13-2Q52LG2 175 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 DNLZQ5SXM8 178 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 SLC25A34Q6PIV7 304 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 SLC16A13Q7RTY0 426 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 MYOCDQ8IZQ8 938 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 OR4K5Q8NGD3 323 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 OR5B3Q8NH48 314 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 LINC01560Q8TB33 94 aa2.78□□□□□ -1.96
HMG20A-211ENST00000560867 N4BP2L2Q92802 583 aaPredicted RBP2.78□□□□□ -1.96
HMG20A-211ENST00000560867 NAP1L5Q96NT1 182 aaPredicted RBP2.78□□□□□ -1.96
HMG20A-211ENST00000560867 CHP1Q99653 195 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms