RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 TXNDC12O95881 172 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 WNT11O96014 354 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 MT-CO3P00414 261 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 CD74P04233 296 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 VSIG10L2P0DP72 767 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 GLB1P16278 677 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 HIST1H1CP16403 213 aaKnown RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 FSTP19883 344 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 PMELP40967 661 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ECI1P42126 302 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 CAPZBP47756 277 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 LUMP51884 338 aaPredicted RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 CLDN6P56747 220 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 CD81P60033 236 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 LSM11P83369 360 aaKnown RBP eCLIP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 SMCO1Q147U7 214 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ARL6IP1Q15041 203 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 INPP5JQ15735 1006 aaPredicted RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 DUSP5Q16690 384 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 SFRP5Q5T4F7 317 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 FAM180BQ6P0A1 224 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 GUSBP11Q6P575 273 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 RPTNQ6XPR3 784 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 LINC00114Q6XXX2 140 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 THSD4Q6ZMP0 1018 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 RNF44Q7L0R7 432 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 LYG2Q86SG7 212 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 LRRTM1Q86UE6 522 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 BAP18Q8IXM2 172 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ZNF561Q8N587 486 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 DTX3Q8N9I9 347 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 DMBX1Q8NFW5 382 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 OR7G2Q8NG99 324 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 OR1J2Q8NGS2 313 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 OR6K6Q8NGW6 343 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 MITD1Q8WV92 249 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 PATE1Q8WXA2 126 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ZCCHC14Q8WYQ9 949 aaKnown RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 NAT6Q93015 286 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 RERGQ96A58 199 aaPredicted RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 TM4SF19Q96DZ7 209 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 DCBLD2Q96PD2 775 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 TNFRSF13CQ96RJ3 184 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ZFYVE21Q9BQ24 234 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ALG12Q9BV10 488 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 POFUT1Q9H488 388 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 CDCP1Q9H5V8 836 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 TUBA4BQ9H853 241 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 WDR76Q9H967 626 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 RNF122Q9H9V4 155 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 BARX1Q9HBU1 254 aaPredicted RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 ADAP2Q9NPF8 381 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 EXOSC3Q9NQT5 275 aaKnown RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 TMEM100Q9NV29 134 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 COA4Q9NYJ1 87 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 MRPL15Q9P015 296 aaKnown RBP7.72□□□□□ -1.17
CCDC33-209ENST00000560565 DNAJB11Q9UBS4 358 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 PILRAQ9UKJ1 303 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 PCDHB10Q9UN67 800 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 KCNE3Q9Y6H6 103 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 RELNP78509 3460 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 FER1L5A0AVI2 2057 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 FBN2P35556 2912 aa7.72□□□□□ -1.17
CCDC33-209ENST00000560565 C2CD3Q4AC94 2353 aa7.71□□□□□ -1.17
CCDC33-209ENST00000560565 AHCTF1Q8WYP5 2266 aa7.71□□□□□ -1.17
CCDC33-209ENST00000560565 CFAP46Q8IYW2 2715 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 TRAV18A0A075B6X5 111 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 TRAV27A0A087WT01 109 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 A0A087WUJ7 227 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 TRBV6-7A0A0A0MS04 114 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 TEX13DA0A0J9YY54 714 aaPredicted RBP7.71□□□□□ -1.18
CCDC33-209ENST00000560565 GLOD5A6NK44 160 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 RHPN2P1A8MT19 583 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 F8VVB4 439 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 F8VWA3 439 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 TO15178 435 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 PPM1DO15297 605 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 GPR75O95800 540 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 CBX7O95931 251 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 IL2RAP01589 272 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 HLA-AP01891 365 aaKnown RBP7.71□□□□□ -1.18
CCDC33-209ENST00000560565 IFNA6P05013 189 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 ERCC1P07992 297 aaPredicted RBP7.71□□□□□ -1.18
CCDC33-209ENST00000560565 CD14P08571 375 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 ABOP16442 354 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 PSMB6P28072 239 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 ADH6P28332 368 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 SDHAP31040 664 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 RPL35P42766 123 aaKnown RBP7.71□□□□□ -1.18
CCDC33-209ENST00000560565 PJVKQ0ZLH3 352 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 SQSTM1Q13501 440 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 PEA15Q15121 130 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 TAF13Q15543 124 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 ZNF141Q15928 474 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 RNASE10Q5GAN6 216 aaKnown RBP7.71□□□□□ -1.18
CCDC33-209ENST00000560565 FAM76BQ5HYJ3 339 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 ZNF684Q5T5D7 378 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 C18orf63Q68DL7 685 aa7.71□□□□□ -1.18
CCDC33-209ENST00000560565 H3F3CQ6NXT2 135 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms