RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 CHP1Q99653 195 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 HDHD3Q9BSH5 251 aaPredicted RBP3.55□□□□□ -1.84
MARK3-220ENST00000560417 MRPL37Q9BZE1 423 aaKnown RBP3.55□□□□□ -1.84
MARK3-220ENST00000560417 TMEM185BQ9H7F4 350 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 VPS37BQ9H9H4 285 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 ING4Q9UNL4 249 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 UBR3Q6ZT12 1888 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 C4AP0C0L4 1744 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 C4BP0C0L5 1744 aa3.55□□□□□ -1.84
MARK3-220ENST00000560417 KCPQ6ZWJ8 1503 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 MRC1P22897 1456 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 PALLDQ8WX93 1383 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 UBR2Q8IWV8 1755 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 QSER1Q2KHR3 1735 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 SMCO3A2RU48 225 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 CHST1O43916 411 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 DFNA5O60443 496 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 CLIC3O95833 236 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 TPM2P07951 284 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ZNF136P52737 540 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ACTA2P62736 377 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ACTG2P63267 376 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ACTC1P68032 377 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ACTA1P68133 377 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 SMARCB1Q12824 385 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 RCN1Q15293 331 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ALKBH6Q3KRA9 238 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 Q6P435 159 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 TMEM179Q6ZVK1 233 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 FAM104AQ969W3 186 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 ZNF414Q96IQ9 312 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 P2RX4Q99571 388 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 SLC29A1Q99808 456 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 FAM192AQ9GZU8 254 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 RPF2Q9H7B2 306 aaKnown RBP3.54□□□□□ -1.84
MARK3-220ENST00000560417 PITPNC1Q9UKF7 332 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 VANGL2Q9ULK5 521 aa3.54□□□□□ -1.84
MARK3-220ENST00000560417 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.53□□□□□ -1.84
MARK3-220ENST00000560417 A0A075B6Q4 140 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 LRRIQ3A6PVS8 624 aaPredicted RBP3.53□□□□□ -1.84
MARK3-220ENST00000560417 F6UB75 175 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 CD5LO43866 347 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 OR2F2O95006 317 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 SLC25A27O95847 323 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 ANXA5P08758 320 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 AK4P27144 223 aaPredicted RBP3.53□□□□□ -1.84
MARK3-220ENST00000560417 HOXA9P31269 272 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 PRRX1P54821 245 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 NUTF2P61970 127 aaKnown RBP3.53□□□□□ -1.84
MARK3-220ENST00000560417 ECH1Q13011 328 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 SLC39A6Q13433 755 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 SPANXN2Q5MJ10 180 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 SCD5Q86SK9 330 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 MREGQ8N565 214 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 DUSP18Q8NEJ0 188 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 LKAAEAR1Q8TD35 194 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 ZNF285Q96NJ3 590 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 PANX1Q96RD7 426 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 LINC00597Q9H2U6 94 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 ZNF160Q9HCG1 818 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 GPATCH2LQ9NWQ4 482 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 KIAA1257Q9ULG3 409 aa3.53□□□□□ -1.84
MARK3-220ENST00000560417 COL24A1Q17RW2 1714 aa3.53□□□□□ -1.85
MARK3-220ENST00000560417 HIDE1A8MVS5 230 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 AIFM1O95831 613 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 HOXC4P09017 264 aaPredicted RBP3.52□□□□□ -1.85
MARK3-220ENST00000560417 RAB10P61026 200 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 RPS15P62841 145 aaKnown RBP3.52□□□□□ -1.85
MARK3-220ENST00000560417 ADARB1P78563 741 aaKnown RBP3.52□□□□□ -1.85
MARK3-220ENST00000560417 SLC7A9P82251 487 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 SLC25A11Q02978 314 aaKnown RBP3.52□□□□□ -1.85
MARK3-220ENST00000560417 GBE1Q04446 702 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 C9orf135Q5VTT2 229 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 REEP3Q6NUK4 255 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 STRADAQ7RTN6 431 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 IQCKQ8N0W5 287 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 Q8N9L7 120 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 MARCH1Q8TCQ1 289 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 SLC7A13Q8TCU3 470 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 MCUR1Q96AQ8 359 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 TAAR1Q96RJ0 339 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 C20orf24Q9BUV8 137 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 KDM3BQ7LBC6 1761 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 KIAA1551Q9HCM1 1747 aa3.52□□□□□ -1.85
MARK3-220ENST00000560417 CICQ96RK0 1608 aaPredicted RBP3.52□□□□□ -1.85
MARK3-220ENST00000560417 CARMIL3Q8ND23 1372 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 MAP3K5Q99683 1374 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 IGLV11-55A0A075B6I3 123 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 A0A096LNJ9 63 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 GLYATL1P3A0A0U1RQE8 302 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 ZNF816-ZNF321PA0A0X1KG74 233 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 H0YHG0 523 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 SIRPB1O00241 398 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 AIM2O14862 343 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 CDH16O75309 829 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 H6PDO95479 791 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 RRM2P31350 389 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 C21orf59P57076 290 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 MADCAM1Q13477 382 aa3.51□□□□□ -1.85
MARK3-220ENST00000560417 CLINT1Q14677 625 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms