RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 FAM184AQ8NB25 1140 aa7.07□□□□□ -1.28
CASC4-208ENST00000559151 ZNF596Q8TC21 504 aa7.07□□□□□ -1.28
CASC4-208ENST00000559151 APH1BQ8WW43 257 aa7.07□□□□□ -1.28
CASC4-208ENST00000559151 PIGUQ9H490 435 aa7.07□□□□□ -1.28
CASC4-208ENST00000559151 CARMIL3Q8ND23 1372 aa7.07□□□□□ -1.28
CASC4-208ENST00000559151 PLEKHG2Q9H7P9 1386 aa7.07□□□□□ -1.28
CASC4-208ENST00000559151 H7C0C1 242 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 L7N2F9 121 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 BCKDKO14874 412 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 ANGPTL7O43827 346 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 RDH16O75452 317 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 TLX1NBP0CAT3 122 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 TNFSF9P41273 254 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 RPS15AP62244 130 aaKnown RBP7.06□□□□□ -1.28
CASC4-208ENST00000559151 FAM92BQ6ZTR7 304 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 OR10AD1Q8NGE0 317 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 OR52E2Q8NGJ4 325 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 LRRC29Q8WV35 223 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 SEH1LQ96EE3 360 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 JSRP1Q96MG2 331 aaPredicted RBP7.06□□□□□ -1.28
CASC4-208ENST00000559151 RHBDD3Q9Y3P4 386 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 DENND4AQ7Z401 1863 aa7.06□□□□□ -1.28
CASC4-208ENST00000559151 COL16A1Q07092 1604 aaPredicted RBP7.05□□□□□ -1.28
CASC4-208ENST00000559151 TET2Q6N021 2002 aaPredicted RBP7.05□□□□□ -1.28
CASC4-208ENST00000559151 H0YC42 278 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 U2AF2P26368 475 aaKnown RBP eCLIP7.05□□□□□ -1.28
CASC4-208ENST00000559151 CSNK1A1P48729 337 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 RAB11AP62491 216 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 SEMG2Q02383 582 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 ERCC8Q13216 396 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 PON2Q15165 354 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 RAB11BQ15907 218 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 HADHQ16836 314 aaKnown RBP7.05□□□□□ -1.28
CASC4-208ENST00000559151 TRMT5Q32P41 509 aaKnown RBP7.05□□□□□ -1.28
CASC4-208ENST00000559151 TPTE2P1Q5T6R2 138 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 MBOAT2Q6ZWT7 520 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 EXOSC8Q96B26 276 aaKnown RBP7.05□□□□□ -1.28
CASC4-208ENST00000559151 ZNF707Q96C28 371 aaPredicted RBP7.05□□□□□ -1.28
CASC4-208ENST00000559151 CLN6Q9NWW5 311 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 SAR1BQ9Y6B6 198 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 PIKFYVEQ9Y2I7 2098 aa7.05□□□□□ -1.28
CASC4-208ENST00000559151 SIVA1O15304 175 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 ATF6P18850 670 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 KLHL40Q2TBA0 621 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
CASC4-208ENST00000559151 NPSR1Q6W5P4 371 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 MRPL55Q7Z7F7 128 aaKnown RBP7.04□□□□□ -1.28
CASC4-208ENST00000559151 LRRC75AQ8NAA5 344 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 NOXO1Q8NFA2 376 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 OR51E1Q8TCB6 317 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 GALNT14Q96FL9 552 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 OPALINQ96PE5 141 aa7.04□□□□□ -1.28
CASC4-208ENST00000559151 PARP12Q9H0J9 701 aaKnown RBP7.04□□□□□ -1.28
CASC4-208ENST00000559151 SCRIBQ14160 1630 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 COL22A1Q8NFW1 1626 aaPredicted RBP7.03□□□□□ -1.28
CASC4-208ENST00000559151 IGHV5-51A0A0C4DH38 117 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 HLA-DPB1P04440 258 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 WARSP23381 471 aaKnown RBP7.03□□□□□ -1.28
CASC4-208ENST00000559151 RFC3P40938 356 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 SLC11A1P49279 550 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 IFT88Q13099 833 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 NCF4Q15080 339 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 QPRTQ15274 297 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 METTL21CQ5VZV1 264 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 APRG1Q8IVJ8 170 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 CA5BP1Q8WTZ4 195 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 FOXC2Q99958 501 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 BCL7BQ9BQE9 202 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 BLZF1Q9H2G9 400 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 CYP3A43Q9HB55 503 aa7.03□□□□□ -1.28
CASC4-208ENST00000559151 MRM3Q9HC36 420 aaKnown RBP7.03□□□□□ -1.28
CASC4-208ENST00000559151 PEF1Q9UBV8 284 aaKnown RBP7.03□□□□□ -1.28
CASC4-208ENST00000559151 ARHGEF11O15085 1522 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 Q6P435 159 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 LINC01551Q86U37 167 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 ENTHD1Q8IYW4 607 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 NPWQ8N729 165 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 FAM86B1Q8N7N1 296 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 ZNF321PQ8N8H1 164 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 Q8N9L7 120 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 CHST4Q8NCG5 386 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 MRGPRFQ96AM1 343 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 ZNF285Q96NJ3 590 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 OR2A5Q96R48 311 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 FAM49BQ9NUQ9 324 aa7.02□□□□□ -1.29
CASC4-208ENST00000559151 TRMT112Q9UI30 125 aaKnown RBP7.02□□□□□ -1.29
CASC4-208ENST00000559151 MROH7-TTC4A0A0A0MT08 1334 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 LRP4O75096 1905 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 TSPAN11A1L157 253 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 SCELO95171 688 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 BCHEP06276 602 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 ZNF823P16415 610 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 CD82P27701 267 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 VSX2P58304 361 aaPredicted RBP7.01□□□□□ -1.29
CASC4-208ENST00000559151 FAM122BQ7Z309 247 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 FAM104AQ969W3 186 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 NTAN1Q96AB6 310 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 ZNF681Q96N22 645 aa7.01□□□□□ -1.29
CASC4-208ENST00000559151 ZNF317Q96PQ6 595 aaPredicted RBP7.01□□□□□ -1.29
CASC4-208ENST00000559151 LHX9Q9NQ69 397 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms