RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 MYLK2Q9H1R3 596 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 SYT4Q9H2B2 425 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 RERGLQ9H628 205 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 TUBG2Q9NRH3 451 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 DCAF13Q9NV06 445 aaKnown RBP9.73□□□□□ -0.85
CASC4-205ENST00000558735 ABCD2Q9UBJ2 740 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 CGGBP1Q9UFW8 167 aaPredicted RBP9.73□□□□□ -0.85
CASC4-205ENST00000558735 EGFL7Q9UHF1 273 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 IL20RAQ9UHF4 553 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 OPN4Q9UHM6 478 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 NDRG4Q9ULP0 352 aaKnown RBP9.73□□□□□ -0.85
CASC4-205ENST00000558735 PCDHB10Q9UN67 800 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 TMEM5Q9Y2B1 443 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 FAM32AQ9Y421 112 aaKnown RBP9.73□□□□□ -0.85
CASC4-205ENST00000558735 IER3IP1Q9Y5U9 82 aa9.73□□□□□ -0.85
CASC4-205ENST00000558735 A0A0G2JMP0 313 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 A0A0X1KG70 313 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 J3QLI3 93 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 NDUFAB1O14561 156 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 TIMM8AO60220 97 aaPredicted RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 DOK2O60496 412 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 KHDRBS3O75525 346 aaKnown RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 DIRAS1O95057 198 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 TXNDC12O95881 172 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 ADRA2CP18825 462 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 KITLGP21583 273 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 EPHA1P21709 976 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 ZFP36P26651 326 aaKnown RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 HTR5AP47898 357 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 NUDT2P50583 147 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 LSM6P62312 80 aaKnown RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 LCN2P80188 198 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 KCNMB1Q16558 191 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 DCAF12L2Q5VW00 463 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 GPR139Q6DWJ6 353 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 ZNF771Q7L3S4 317 aaPredicted RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 C1QL2Q7Z5L3 287 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 ZER1Q7Z7L7 766 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 GLB1L2Q8IW92 636 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 FAM86B1Q8N7N1 296 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 OR4M2Q8NGB6 313 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 SAMD8Q96LT4 415 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 GPX7Q96SL4 187 aaPredicted RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 GAL3ST1Q99999 423 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 ELAC2Q9BQ52 826 aaKnown RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 RBM4Q9BWF3 364 aaKnown RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 C7orf69Q9H7B7 122 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 TMEM106BQ9NUM4 274 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 PLEK2Q9NYT0 353 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 UBAP1Q9NZ09 502 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 VSX1Q9NZR4 365 aaPredicted RBP9.72□□□□□ -0.85
CASC4-205ENST00000558735 RPS6KA6Q9UK32 745 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 NPTNQ9Y639 398 aa9.72□□□□□ -0.85
CASC4-205ENST00000558735 ISPDA4D126 451 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 OR6C6A6NF89 314 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 TRIM77I1YAP6 450 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 DCTN6O00399 190 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 SOCS2O14508 198 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 RER1O15258 196 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 GPANK1O95872 356 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 IGHV2-70P01814 119 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 DBHP09172 617 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 GSTM3P21266 225 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 ERFP50548 548 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 HIST1H3AP68431 136 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 DBPQ10586 325 aaPredicted RBP9.71□□□□□ -0.86
CASC4-205ENST00000558735 AQP6Q13520 282 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 KRR1Q13601 381 aaKnown RBP9.71□□□□□ -0.86
CASC4-205ENST00000558735 RSPO1Q2MKA7 263 aaPredicted RBP9.71□□□□□ -0.86
CASC4-205ENST00000558735 HSP90B2PQ58FF3 399 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 ZMAT1Q5H9K5 638 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 FGD3Q5JSP0 725 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 HIST2H3PS2Q5TEC6 136 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 C1orf94Q6P1W5 598 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 DPY19L2P2Q6ZN68 376 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 HIST2H3AQ71DI3 136 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 PEG10Q86TG7 708 aaKnown RBP9.71□□□□□ -0.86
CASC4-205ENST00000558735 LRRC28Q86X40 367 aaPredicted RBP9.71□□□□□ -0.86
CASC4-205ENST00000558735 TEX29Q8N6K0 151 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 RNF148Q8N7C7 305 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 ZNF283Q8N7M2 679 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 NPEPL1Q8NDH3 523 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 OR2Z1Q8NG97 314 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 OR52J3Q8NH60 311 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 OR1F12Q8NHA8 337 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 NANPQ8TBE9 248 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 CMTM5Q96DZ9 223 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 RSRC1Q96IZ7 334 aaKnown RBP9.71□□□□□ -0.86
CASC4-205ENST00000558735 DHRS1Q96LJ7 313 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 TSSK2Q96PF2 358 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 MMP26Q9NRE1 261 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 ASH2LQ9UBL3 628 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 IL19Q9UHD0 177 aa9.71□□□□□ -0.86
CASC4-205ENST00000558735 PPIAL4EA0A075B759 164 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 PPIAL4CA0A0B4J2A2 164 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 UNC119BA6NIH7 251 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 PPIAL4DF5H284 164 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 TRAPPC2LH3BP13 241 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 FSHBP01225 129 aa9.7□□□□□ -0.86
CASC4-205ENST00000558735 PPIAL4FP0DN26 164 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms