RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 NAGKQ9UJ70 344 aa2.35□□□□□ -2.03
TRAV28-201ENST00000557548 ASF1AQ9Y294 204 aa2.35□□□□□ -2.03
TRAV28-201ENST00000557548 GOLT1BQ9Y3E0 138 aa2.35□□□□□ -2.03
TRAV28-201ENST00000557548 KPTNQ9Y664 436 aa2.35□□□□□ -2.03
TRAV28-201ENST00000557548 LRPPRCP42704 1394 aaKnown RBP2.35□□□□□ -2.03
TRAV28-201ENST00000557548 LRRIQ1Q96JM4 1722 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PHF3Q92576 2039 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PCNX3Q9H6A9 2034 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 IGKV3D-15A0A087WSY6 115 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 IGKV1D-13A0A0B4J2D9 117 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF726A6NNF4 738 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 KRTAP9-6A8MVA2 160 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 GPR171O14626 319 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SLC9A3R1O14745 358 aaPredicted RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 LIN7AO14910 233 aaPredicted RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CLDN11O75508 207 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SNAPINO95295 136 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 FARS2O95363 451 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 IGKV1-13P0DP09 117 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 NR2C1P13056 603 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PMCHP20382 165 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 GABRR2P28476 465 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SHC1P29353 583 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PRKAR2BP31323 418 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CFHR2P36980 270 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 P2RY2P41231 377 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CDKN2CP42773 168 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CBX5P45973 191 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 UGT2B15P54855 530 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 DLX1P56177 255 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 RWDD2BP57060 319 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 UBE2G2P60604 165 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF33AQ06730 810 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SIGLEC14Q08ET2 396 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 GGTLC2Q14390 218 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 TSC22D1Q15714 1073 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PSMD5Q16401 504 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 MRGPRG-AS1Q2M3A8 158 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 HIGD2BQ4VC39 106 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CLVS2Q5SYC1 327 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ATAD3CQ5T2N8 411 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 GFI1BQ5VTD9 330 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 MFSD14CQ5VZR4 134 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 FAM151BQ6UXP7 276 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ASCL4Q6XD76 172 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 NCCRP1Q6ZVX7 275 aaPredicted RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PID1Q7Z2X4 250 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ABHD12BQ7Z5M8 362 aaPredicted RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 THOC6Q86W42 341 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 FBXO16Q8IX29 292 aaPredicted RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ZADH2Q8N4Q0 377 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 NKAPP1Q8N9T2 125 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 NECAP1Q8NC96 275 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF740Q8NDX6 193 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CCDC112Q8NEF3 446 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 TTLQ8NG68 377 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 OR2AP1Q8NGE2 309 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SDR42E1Q8WUS8 393 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 NDRG1Q92597 394 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 FAM131CQ96AQ9 280 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 RPUSD4Q96CM3 377 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 C9orf72Q96LT7 481 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CSPG4P5Q96PW8 444 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SMIM14Q96QK8 99 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 RIOK2Q9BVS4 552 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 DEFB126Q9BYW3 111 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 POTEKPQ9BYX7 375 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 DERL2Q9GZP9 239 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SRMSQ9H3Y6 488 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF702PQ9H963 129 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PRSS16Q9NQE7 514 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 MARCH5Q9NX47 278 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 CD274Q9NZQ7 290 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ABCD2Q9UBJ2 740 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 ZNF229Q9UJW7 825 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 YARS2Q9Y2Z4 477 aaKnown RBP2.34□□□□□ -2.03
TRAV28-201ENST00000557548 SAR1BQ9Y6B6 198 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 PRSS21Q9Y6M0 314 aa2.34□□□□□ -2.03
TRAV28-201ENST00000557548 TOP2BQ02880 1626 aa2.34□□□□□ -2.04
TRAV28-201ENST00000557548 RLFQ13129 1914 aa2.34□□□□□ -2.04
TRAV28-201ENST00000557548 CTTNBP2Q8WZ74 1663 aa2.34□□□□□ -2.04
TRAV28-201ENST00000557548 KIF26BQ2KJY2 2108 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 A0A1B0GW15 77 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GOLGA8JA6NMD2 632 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 OR5K4A6NMS3 321 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 LYRM9A8MSI8 78 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GOLGA8KD6RF30 607 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 E7EWF7 191 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 GOLGA6L19H0YKK7 550 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 H3BQV1 296 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 CYTH3O43739 400 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 DPM1O60762 260 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 FKBP6O75344 327 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 HSBP1O75506 76 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 SERF1AO75920 110 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 NSA2O95478 260 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 FADS2O95864 444 aaKnown RBP2.33□□□□□ -2.04
TRAV28-201ENST00000557548 TIMP1P01033 207 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 CST4P01036 141 aa2.33□□□□□ -2.04
TRAV28-201ENST00000557548 THY1P04216 161 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms