RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 CENPAP49450 140 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CDH15P55291 814 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CCL8P80075 99 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SCGB2A2Q13296 93 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 LSAMPQ13449 338 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 RIN1Q13671 783 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 MAD2L1BPQ15013 274 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 HFEQ30201 348 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ALKBH6Q3KRA9 238 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 DNM1P34Q6PK57 102 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SMARCD3Q6STE5 483 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 Q6ZS46 218 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 PEG10Q86TG7 708 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 MEX3DQ86XN8 651 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 GLB1L2Q8IW92 636 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 AKR7LQ8NHP1 331 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ABHD4Q8TB40 342 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 TMEM158Q8WZ71 300 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 POP5Q969H6 163 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 NABP1Q96AH0 204 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 C4orf45Q96LM5 186 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 OR2H1Q9GZK4 316 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SAP30LQ9HAJ7 183 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 NKIRAS2Q9NYR9 191 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 POLR1DQ9Y2S0 133 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ADAM18Q9Y3Q7 739 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 UGT2A1Q9Y4X1 527 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 V9GYQ6 96 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 DNHD1Q96M86 4753 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 STAB1Q9NY15 2570 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 IGLV3-9A0A075B6K5 115 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 UNC119BA6NIH7 251 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 LYNX1G3V0Z9 82 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SGCEO43556 437 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SLC16A7O60669 478 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 KHDRBS3O75525 346 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ALX3O95076 343 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ABHD16AO95870 558 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CLPTM1O96005 669 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 HPXP02790 462 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 AMY2AP04746 511 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 LYNX1P0DP58 116 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 AMY2BP19961 511 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 TNFSF4P23510 183 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 RRM2P31350 389 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SRP14P37108 136 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ZNF81P51508 661 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SPIBQ01892 262 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SLC3A1Q07837 685 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 FAM120AOSQ5T036 256 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 DEFB107AQ8IZN7 70 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 PAQR4Q8N4S7 273 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 LINC00471Q8N535 108 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CLDN22Q8N7P3 220 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 LRRC75AQ8NAA5 344 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 OR5L1Q8NGL2 311 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 KLF14Q8TD94 323 aaPredicted RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 NMD3Q96D46 503 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 RSRC1Q96IZ7 334 aaKnown RBP6.27□□□□□ -1.41
SCFD1-222ENST00000556768 POM121L2Q96KW2 1035 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 C7orf34Q96L11 122 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 Q96M85 177 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 DIRC2Q96SL1 478 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 KCNJ15Q99712 375 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 CDADC1Q9BWV3 514 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SYT4Q9H2B2 425 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ZMAT4Q9H898 229 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 IL1RAPQ9NPH3 570 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 NRIP3Q9NQ35 241 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 POLE4Q9NR33 117 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 PLEK2Q9NYT0 353 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 ZDHHC8Q9ULC8 765 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 SIGLEC7Q9Y286 467 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 IER3IP1Q9Y5U9 82 aa6.27□□□□□ -1.41
SCFD1-222ENST00000556768 LOC100509620A0A075B734 347 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 IGKV1D-43A0A0B4J1Z2 117 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 IGHV1-69-2A0A0G2JMI3 117 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 TEX13CA0A0J9YWL9 993 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 H3BSA7 217 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 H7C1C5 153 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 SOCS2O14508 198 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 DOK2O60496 412 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 CDC14BO60729 498 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 PTP4A3O75365 173 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 DIRAS1O95057 198 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 RENP00797 406 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 TFP02787 698 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 COX5BP10606 129 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 COL8A2P25067 703 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 SLC6A6P31641 620 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 CRYBB2P43320 205 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 OMPP47874 163 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 HTR5AP47898 357 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 PPP1CBP62140 327 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 LSM6P62312 80 aaKnown RBP6.26□□□□□ -1.41
SCFD1-222ENST00000556768 LCN6P62502 163 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 GLO1Q04760 184 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 AQP6Q13520 282 aa6.26□□□□□ -1.41
SCFD1-222ENST00000556768 KRR1Q13601 381 aaKnown RBP6.26□□□□□ -1.41
SCFD1-222ENST00000556768 CCNIQ14094 377 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms