RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 A0A1W2PPE3 182 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 A0A1W2PQM1 296 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 TVP23AA6NH52 213 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 AQP7P3A6NL99 342 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 DHRS7CA6NNS2 312 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ANKRD66B4E2M5 251 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PPIAL4DF5H284 164 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 TNFRSF11BO00300 401 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 P2RY10O00398 339 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 LYRM1O43325 122 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SLC37A4O43826 429 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PRAMEF10O60809 474 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SLC25A12O75746 678 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ZNF432O94892 652 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SCELO95171 688 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR2C1O95371 312 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SYNGR4O95473 234 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ETHE1O95571 254 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 IL18BPO95998 194 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MT-ND1P03886 318 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ISG15P05161 165 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SERPINE2P07093 398 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ANXA2P07355 339 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 DCNP07585 359 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 PPIAL4FP0DN26 164 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MED14OSP0DP75 135 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 GZMBP10144 247 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MMP11P24347 488 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 GDF1P27539 372 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MDH2P40926 338 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 INPP1P49441 399 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 TCTAP57738 103 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 TAS2R43P59537 309 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PLP1P60201 277 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SLC6A3Q01959 620 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 CD47Q08722 323 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MGAT2Q10469 447 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 FZD5Q13467 585 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 CLINT1Q14677 625 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 RTP5Q14D33 572 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 TEAD2Q15562 447 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 EFNB3Q15768 340 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 UGT8Q16880 541 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SNAI3Q3KNW1 292 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 XP32Q5T750 250 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 GGNBP1Q5YKI7 109 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 KIAA0895LQ68EN5 471 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 TCTN3Q6NUS6 607 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 FAHD1Q6P587 224 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ESPNLQ6ZVH7 1005 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 Q7L0L9 218 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 CPEB2Q7Z5Q1 589 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 DOLPP1Q86YN1 238 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SYT12Q8IV01 421 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SIAH3Q8IW03 269 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 GALNT16Q8N428 558 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 D2HGDHQ8N465 521 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ZNF614Q8N883 585 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 BCORP1Q8N888 145 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR2Z1Q8NG97 314 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR11H4Q8NGC9 324 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR5D13Q8NGL4 314 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR9G4Q8NGQ1 327 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 FEZF2Q8TBJ5 459 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PCNPQ8WW12 178 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 RAD54LQ92698 747 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ARL11Q969Q4 196 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PIK3IP1Q96FE7 263 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 GALNT14Q96FL9 552 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PERPQ96FX8 193 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 COPS8Q99627 209 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PSMG3Q9BT73 122 aaPredicted RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 C1QTNF6Q9BXI9 259 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MEGF9Q9H1U4 602 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MFSD1Q9H3U5 465 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SRMSQ9H3Y6 488 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 METTL17Q9H7H0 456 aaPredicted RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 SEC61A2Q9H9S3 476 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 HHATLQ9HCP6 504 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 G6PC2Q9NQR9 355 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PIGVQ9NUD9 493 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 PNPOQ9NVS9 261 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR6C3Q9NZP0 311 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 DOK5Q9P104 306 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ABI3Q9P2A4 366 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 CDC42EP3Q9UKI2 254 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 NXT1Q9UKK6 140 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 IKZF2Q9UKS7 526 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 CMAHPQ9Y471 501 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 OR51B2Q9Y5P1 312 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 CDH10Q9Y6N8 788 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 SLIT3O75094 1523 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 ARHGEF28Q8N1W1 1705 aaKnown RBP5.56□□□□□ -1.52
TDP1-215ENST00000556498 KIAA1551Q9HCM1 1747 aa5.56□□□□□ -1.52
TDP1-215ENST00000556498 MYH3P11055 1940 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 LOC105369274A0A096LPK9 316 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 LOC102723532A0A0G2JNH3 316 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 OR2A25A4D2G3 310 aa5.55□□□□□ -1.52
TDP1-215ENST00000556498 ANKUB1A6NFN9 424 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms