RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	EDA	Q92838	391 aa		11.16	□□□□□ -0.62
TMPO-212	ENST00000556029	OR2A5	Q96R48	311 aa		11.16	□□□□□ -0.62
TMPO-212	ENST00000556029	RAB19	A4D1S5	217 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	OR2T1	O43869	369 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	GMDS	O60547	372 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	ATF1	P18846	271 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	FCAR	P24071	287 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	BLVRB	P30043	206 aa	Predicted RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	MALL	Q13021	153 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	RBMS2	Q15434	407 aa	Known RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	RFPL4B	Q6ZWI9	263 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	MRPL41	Q8IXM3	137 aa	Known RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	TSLP	Q969D9	159 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	STAC	Q99469	402 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	OR10A5	Q9H207	317 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	GNG13	Q9P2W3	67 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	ADAM18	Q9Y3Q7	739 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	MTCH2	Q9Y6C9	303 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	T	O15178	435 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	ZNF749	O43361	778 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	CDK2	P24941	298 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	CD1C	P29017	333 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	TACR3	P29371	465 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	S100A11	P31949	105 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	UBE2K	P61086	200 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	RNF4	P78317	190 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	TMEM176B	Q3YBM2	270 aa	Predicted RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	FAM74A1	Q5RGS3	127 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	CD276	Q5ZPR3	534 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	RBPMS	Q93062	196 aa	Known RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	MALSU1	Q96EH3	234 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	EMC6	Q9BV81	110 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	ZNF416	Q9BWM5	594 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	CNTNAP3	Q9BZ76	1288 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	PATZ1	Q9HBE1	687 aa	Known RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	OR14J1	Q9UGF5	321 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	PTRH2	Q9Y3E5	179 aa	Known RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029		J3QRE1	110 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	HIST1H1C	P16403	213 aa	Known RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	OR2B8P	P59922	312 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	TMEM244	Q5VVB8	128 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	STEAP1B	Q6NZ63	245 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029		Q6ZTK2	550 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	C9orf62	Q8N4C0	152 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	OR4D9	Q8NGE8	314 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	HPSE2	Q8WWQ2	592 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	KISS1R	Q969F8	398 aa	Predicted RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	FKRP	Q9H9S5	495 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	KCNE5	Q9UJ90	142 aa		11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	ING1	Q9UK53	422 aa	Predicted RBP	11.15	□□□□□ -0.62
TMPO-212	ENST00000556029	TLCD2	A6NGC4	264 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	CD300LB	A8K4G0	201 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	STMND1	H3BQB6	276 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	RAB27B	O00194	218 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	P2RY10	O00398	339 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SCRG1	O75711	98 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	CBX7	O95931	251 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029		P04436	131 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	OR2T7	P0C7T2	308 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	EPX	P11678	715 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	PTHLH	P12272	177 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SERPINF1	P36955	418 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	DEFA6	Q01524	100 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	H3F3C	Q6NXT2	135 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	ZNF440	Q8IYI8	595 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SMRP1	Q8NCR6	262 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	OR2T27	Q8NH04	317 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	POC1B	Q8TC44	478 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SAT2	Q96F10	170 aa	Predicted RBP	11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	CAMK2A	Q9UQM7	478 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SELENOF	O60613	162 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	OR13C7	P0DN81	318 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	NDUFA6	P56556	154 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SNRPN	P63162	240 aa	Known RBP	11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	CAMK2B	Q13554	666 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	FZD2	Q14332	565 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SHE	Q5VZ18	495 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	DMKN	Q6E0U4	476 aa	Predicted RBP	11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	LAMTOR1	Q6IAA8	161 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	MED25	Q71SY5	747 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	OR5L2	Q8NGL0	311 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	OR52I2	Q8NH67	350 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SNIP1	Q8TAD8	396 aa	Known RBP	11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	CHRD	Q9H2X0	955 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	BANF2	Q9H503	90 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	LYRM4	Q9HD34	91 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	FAM60A	Q9NP50	221 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	KCNIP1	Q9NZI2	227 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	ZMIZ1	Q9ULJ6	1067 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	2e-6	■■■■■ 27.9
TMPO-212	ENST00000556029	COL4A3	Q01955	1670 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029		A0A087WV62	115 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SCAF4	O95104	1147 aa	Known RBP	11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	PMP2	P02689	132 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	EMD	P50402	254 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	PHLDA2	Q53GA4	152 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	SOHLH1	Q5JUK2	328 aa		11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	RPL22L1	Q6P5R6	122 aa	Known RBP	11.14	□□□□□ -0.63
TMPO-212	ENST00000556029	MRPL21	Q7Z2W9	205 aa	Known RBP	11.14	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms