RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 FNDC8Q8TC99 324 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SNRNP27Q8WVK2 155 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 TSEN15Q8WW01 171 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 ISOC1Q96CN7 298 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 FAM71F1Q96KD3 344 aaPredicted RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 TP63Q9H3D4 680 aaPredicted RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 SIAEQ9HAT2 523 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 BCO1Q9HAY6 547 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 PLSCR2Q9NRY7 297 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 MRPS18AQ9NVS2 196 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 TMEM38BQ9NVV0 291 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SSR3Q9UNL2 185 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 CEPT1Q9Y6K0 416 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ANKHD1Q8IWZ3 2542 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 TMEM129A0AVI4 362 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 A6NHS1 94 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ACOD1A6NK06 481 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 WDR1O75083 606 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 LCATP04180 440 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ZNF182P17025 639 aaPredicted RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 CAV3P56539 151 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ACTA2P62736 377 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ACTG2P63267 376 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SF3B4Q15427 424 aaKnown RBP eCLIP8.95□□□□□ -0.98
NEK9-205ENST00000555405 UBE2UQ5VVX9 321 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ALDH16A1Q8IZ83 802 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ZNF433Q8N7K0 673 aaPredicted RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 DGCR14Q96DF8 476 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 UGT2A1Q9Y4X1 527 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ZNF724A8MTY0 619 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 P2RY10O00398 339 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 PNPP00491 289 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 GAAP10253 952 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 IL32P24001 234 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 TDGF1P3P51864 188 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 NANOS3P60323 173 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 TGFBR3Q03167 851 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 FAM27E3Q08E93 113 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 INAQ16352 499 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 PABPC1L2AQ5JQF8 200 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 OR2A2Q6IF42 318 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 CEACAM19Q7Z692 300 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 ZNF679Q8IYX0 411 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 GJC3Q8NFK1 279 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 OR10AC1Q8NH08 325 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 OR8B4Q96RC9 309 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SIGLEC11Q96RL6 698 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 DCLRE1CQ96SD1 692 aaKnown RBP8.95□□□□□ -0.98
NEK9-205ENST00000555405 SLX1AQ9BQ83 275 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 FANCFQ9NPI8 374 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 SNTG1Q9NSN8 517 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 TUBD1Q9UJT1 453 aa8.95□□□□□ -0.98
NEK9-205ENST00000555405 IGKV3D-15A0A087WSY6 115 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 TRIM64A6NGJ6 449 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 NPIPB13A6NJU9 1138 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 NPIPB4C9JG80 1138 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 ATE1O95260 518 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 GLI4P10075 376 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 MFGE8Q08431 387 aaPredicted RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 CXorf67Q86X51 503 aaPredicted RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 OR52N1Q8NH53 320 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 NDNFQ8TB73 568 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 PGAM5Q96HS1 289 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 CYB5R1Q9UHQ9 305 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 OCM2P0CE71 109 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 OCMP0CE72 109 aaPredicted RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 GNALP38405 381 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 PLP2Q04941 152 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 MLLT11Q13015 90 aaPredicted RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 TMED1Q13445 227 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 ENDOGQ14249 297 aaKnown RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 ZNF324BQ6AW86 544 aaPredicted RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 STARD4Q96DR4 205 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 CCDC120Q96HB5 630 aa8.94□□□□□ -0.98
NEK9-205ENST00000555405 LSM2Q9Y333 95 aaKnown RBP8.94□□□□□ -0.98
NEK9-205ENST00000555405 SMIM31A0A1B0GVY4 71 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 C5orf49A4QMS7 147 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 GPX5O75715 221 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 SFTPCP11686 197 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 IGHV1-2P23083 117 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 CALRP27797 417 aaKnown RBP8.93□□□□□ -0.98
NEK9-205ENST00000555405 PSG4Q00888 419 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 GGTLC2Q14390 218 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 TFAP2EQ6VUC0 442 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 OR5AK2Q8NH90 309 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 TRMT61AQ96FX7 289 aaKnown RBP8.93□□□□□ -0.98
NEK9-205ENST00000555405 ZNF649Q9BS31 505 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 J3QRE1 110 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 ERVH48-1M5A8F1 160 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 CDRT1O95170 752 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 CLEC2LP0C7M8 214 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 JUNBP17275 347 aaPredicted RBP8.93□□□□□ -0.98
NEK9-205ENST00000555405 MPGP29372 298 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 OR3A2P47893 321 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 UQCRFS1P47985 274 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 TGM4P49221 684 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 MRPS34P82930 218 aaKnown RBP8.93□□□□□ -0.98
NEK9-205ENST00000555405 FABP5Q01469 135 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 SPCS2Q15005 226 aa8.93□□□□□ -0.98
NEK9-205ENST00000555405 HIST3H3Q16695 136 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms