RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 SGCAQ16586 387 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 GSG1Q2KHT4 349 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 FREM1Q5H8C1 2179 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 OR2G6Q5TZ20 316 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 OTPQ5XKR4 325 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 TMEM53Q6P2H8 277 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 SLC16A14Q7RTX9 510 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 SVOPQ8N4V2 548 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 RFLNBQ8N5W9 214 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 RORBQ92753 470 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 PIK3IP1Q96FE7 263 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 KCNS3Q9BQ31 491 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 RACGAP1Q9H0H5 632 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 NELFAQ9H3P2 528 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 WDR76Q9H967 626 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 ISG20L2Q9H9L3 353 aaKnown RBP9.52□□□□□ -0.89
SHMT2-218ENST00000555213 COPS3Q9UNS2 423 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 COA3Q9Y2R0 106 aaPredicted RBP9.52□□□□□ -0.89
SHMT2-218ENST00000555213 POLR1DQ9Y2S0 133 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 EXOSC1Q9Y3B2 195 aaKnown RBP9.52□□□□□ -0.89
SHMT2-218ENST00000555213 UGT2A1Q9Y4X1 527 aa9.52□□□□□ -0.89
SHMT2-218ENST00000555213 SMIM31A0A1B0GVY4 71 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 A0A1W2PQL4 384 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 TVP23AA6NH52 213 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 TRIM64BA6NI03 449 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 C12orf71A8MTZ7 269 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 M0R1B8 84 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 MAGEB4O15481 346 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 HLA-HP01893 362 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 HLA-DQA2P01906 255 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 CD3EP07766 207 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 PTAFRP25105 342 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 LAP3P28838 519 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 CDAP32320 146 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 BLVRAP53004 296 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 RPS7P62081 194 aaKnown RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 TUBA1BP68363 451 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 SSX1Q16384 188 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 FAM27BQ5VT28 67 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 HIST2H2BCQ6DN03 193 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 SLC16A12Q6ZSM3 486 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 TUBA1AQ71U36 451 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 GPR141Q7Z602 305 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 CDC20BQ86Y33 519 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 ACBD7Q8N6N7 88 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 FAM169BQ8N8A8 192 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 WDR31Q8NA23 367 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 OR10H5Q8NGA6 315 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 GATAD2BQ8WXI9 593 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 DGCR14Q96DF8 476 aaKnown RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 PLPPR2Q96GM1 343 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 FOXN4Q96NZ1 517 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 OPALINQ96PE5 141 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 DOK1Q99704 481 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 CLEC4MQ9H2X3 399 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 RNF121Q9H920 327 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 POLE4Q9NR33 117 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 NDUFA13Q9P0J0 144 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 KLHDC2Q9Y2U9 406 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 SIRT4Q9Y6E7 314 aaPredicted RBP9.51□□□□□ -0.89
SHMT2-218ENST00000555213 COL12A1Q99715 3063 aa9.51□□□□□ -0.89
SHMT2-218ENST00000555213 DEFB108AA8MXU0 73 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 E9PI62 339 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 CST2P09228 141 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 OR2T7P0C7T2 308 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 GAAP10253 952 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 CBR1P16152 277 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 NAA10P41227 235 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-218ENST00000555213 IDH3GP51553 393 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-218ENST00000555213 HSF2Q03933 536 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 PLP2Q04941 152 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 BSPH1Q075Z2 132 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 ACSM1Q08AH1 577 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 GALEQ14376 348 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SPHARQ15513 63 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 PCK2Q16822 640 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 TIGD6Q17RP2 521 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 C3orf36Q3SXR2 165 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 ARMCX4Q5H9R4 360 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 GPR107Q5VW38 600 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF322Q6U7Q0 402 aaPredicted RBP9.5□□□□□ -0.89
SHMT2-218ENST00000555213 FOXL2NBQ6ZUU3 175 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 C22orf34Q6ZV56 151 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 ZNF367Q7RTV3 350 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SLC16A9Q7RTY1 509 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 MDP1Q86V88 176 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SKA3Q8IX90 412 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SLC35F2Q8IXU6 374 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 LRRC18Q8N456 261 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SLC26A10Q8NG04 563 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 OR2T27Q8NH04 317 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 FCGR1BQ92637 280 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 NABP1Q96AH0 204 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 RADILQ96JH8 1075 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 AMELYQ99218 206 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 TBX5Q99593 518 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 MGLLQ99685 303 aa9.5□□□□□ -0.89
SHMT2-218ENST00000555213 SH3GL3Q99963 347 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms