RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 C3orf36Q3SXR2 165 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 RPS26P11Q5JNZ5 115 aaPredicted RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 CD300LDQ6UXZ3 194 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 LINGO2Q7L985 606 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 TSEN54Q7Z6J9 526 aaKnown RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 ZCCHC24Q8N2G6 241 aaKnown RBP7.64□□□□□ -1.19
TDP1-208ENST00000553989 NDNFQ8TB73 568 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 UBASH3BQ8TF42 649 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 CHAC2Q8WUX2 184 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 C1orf159Q96HA4 380 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 TMEM80Q96HE8 168 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 LINC00470Q9BZP3 86 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 NARFLQ9H6Q4 476 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 ZNF442Q9H7R0 627 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 SEC14L4Q9UDX3 406 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 NOX1Q9Y5S8 564 aa7.64□□□□□ -1.19
TDP1-208ENST00000553989 IGHV2OR16-5A0A0B4J2B6 119 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CCRL2O00421 344 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 EREGO14944 169 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 PTTG1O95997 202 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 IGKV3-15P01624 115 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 IGLV1-44P01699 117 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 LCKP06239 509 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 ADRA2AP08913 450 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 TACSTD2P09758 323 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CD79AP11912 226 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 PRG2P13727 222 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CBR1P16152 277 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 GSTM3P21266 225 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 NR4A1P22736 598 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 GIFP27352 417 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 IFNA8P32881 189 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 ARR3P36575 388 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 IFNGR2P38484 337 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 LIPAP38571 399 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 ACAA2P42765 397 aaKnown RBP7.63□□□□□ -1.19
TDP1-208ENST00000553989 P2RY4P51582 365 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CRYBA2P53672 197 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 UGT2B15P54855 530 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 NCS1P62166 190 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 LSM3P62310 102 aaKnown RBP7.63□□□□□ -1.19
TDP1-208ENST00000553989 ACTG1P63261 375 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 HOXC5Q00444 222 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 HGFACQ04756 655 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 LAPTM4AQ15012 233 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 ZSWIM7Q19AV6 140 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 KLHL22Q53GT1 634 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 ZNF311Q5JNZ3 666 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 SPANXN2Q5MJ10 180 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 SLX4IPQ5VYV7 408 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CARD17Q5XLA6 110 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 MDP1Q86V88 176 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 MYPOPQ86VE0 399 aaPredicted RBP7.63□□□□□ -1.19
TDP1-208ENST00000553989 GLCCI1Q86VQ1 547 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CDK20Q8IZL9 346 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CLIP4Q8N3C7 705 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 OR8J1Q8NGP2 316 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 MFSD8Q8NHS3 518 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 STK35Q8TDR2 534 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 MAL2Q969L2 176 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 UBE2FQ969M7 185 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 TMEM19Q96HH6 336 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 BOD1Q96IK1 185 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CCDC32Q9BV29 185 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 NELFAQ9H3P2 528 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 METTL17Q9H7H0 456 aaPredicted RBP7.63□□□□□ -1.19
TDP1-208ENST00000553989 NOX3Q9HBY0 568 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 GPR35Q9HC97 309 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 RCE1Q9Y256 329 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 IFT52Q9Y366 437 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 CMAHPQ9Y471 501 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 SPEF1Q9Y4P9 236 aa7.63□□□□□ -1.19
TDP1-208ENST00000553989 NBEAL1Q6ZS30 2694 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 DSPPQ9NZW4 1301 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 LYNX1G3V0Z9 82 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 M0R233 179 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 MFN2O95140 757 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 AVPP01185 164 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 GASTP01350 101 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 H1F0P07305 194 aaKnown RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 LYNX1P0DP58 116 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 GADD45AP24522 165 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 PSMA1P25786 263 aaKnown RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 EPHA2P29317 976 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 AQP1P29972 269 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 C21orf33P30042 268 aaPredicted RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 SLC15A1P46059 708 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 GALK2Q01415 458 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 RUNX1T1Q06455 604 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 SCGB2A2Q13296 93 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 ZNF770Q6IQ21 691 aaPredicted RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 MEX3DQ86XN8 651 aaKnown RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 UEVLDQ8IX04 471 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.62□□□□□ -1.19
TDP1-208ENST00000553989 FAM169BQ8N8A8 192 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 AQP11Q8NBQ7 271 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 PROKR2Q8NFJ6 384 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 IL17RDQ8NFM7 739 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 OR52J3Q8NH60 311 aa7.62□□□□□ -1.19
TDP1-208ENST00000553989 ZNF417Q8TAU3 575 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms