RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 HLA-DPB1P04440 258 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 EIF4EP06730 217 aaKnown RBP3.17□□□□□ -1.9
SYNE2-210ENST00000553455 NPSR1Q6W5P4 371 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 CYB561D1Q8N8Q1 229 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 OR10G2Q8NGC3 310 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 OR52E2Q8NGJ4 325 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 ABHD3Q8WU67 409 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 PEX13Q92968 403 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 TMEM230Q96A57 120 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 NAP1L5Q96NT1 182 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-210ENST00000553455 ANP32EQ9BTT0 268 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 UBE2ZQ9H832 354 aaPredicted RBP3.17□□□□□ -1.9
SYNE2-210ENST00000553455 PSG11Q9UQ72 335 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 UBN2Q6ZU65 1347 aa3.17□□□□□ -1.9
SYNE2-210ENST00000553455 IGHV5-10-1A0A0J9YXX1 117 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 CASC3O15234 703 aaKnown RBP3.16□□□□□ -1.9
SYNE2-210ENST00000553455 ENTPD5O75356 428 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 SPAG7O75391 227 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 FCN3O75636 299 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 FGFR1OPO95684 399 aaKnown RBP3.16□□□□□ -1.9
SYNE2-210ENST00000553455 OXTP01178 125 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 STAG3L3P0CL85 134 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 U2AF2P26368 475 aaKnown RBP eCLIP3.16□□□□□ -1.9
SYNE2-210ENST00000553455 LONP1P36776 959 aaKnown RBP3.16□□□□□ -1.9
SYNE2-210ENST00000553455 NBL1P41271 181 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 SLC1A2P43004 574 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 UBE2MP61081 183 aaKnown RBP3.16□□□□□ -1.9
SYNE2-210ENST00000553455 SEMG2Q02383 582 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 LRRC63Q05C16 580 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 EBI3Q14213 229 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 QPRTQ15274 297 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 FAM83EQ2M2I3 478 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 METTL21CQ5VZV1 264 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 SAXO1Q8IYX7 474 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 JAGN1Q8N5M9 183 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 C8orf31Q8N9H6 132 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 VCXQ9H320 206 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 C12orf10Q9HB07 376 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 CRLF2Q9HC73 371 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 MYOZ2Q9NPC6 264 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 CLN6Q9NWW5 311 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 PSME2Q9UL46 239 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 RCL1Q9Y2P8 373 aaKnown RBP3.16□□□□□ -1.9
SYNE2-210ENST00000553455 GAKO14976 1311 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 ARID1AO14497 2285 aa3.16□□□□□ -1.9
SYNE2-210ENST00000553455 A0A1W2PNU3 283 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 L7N2F9 121 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 M0R3G1 203 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 AKR7A2O43488 359 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 HLA-HP01893 362 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 HBE1P02100 147 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 CLTAP09496 248 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 CD3GP09693 182 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 UBCP0CG48 685 aaKnown RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 IGHV1-8P0DP01 117 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 CSNK2A2P19784 350 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 WARSP23381 471 aaKnown RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 MNAT1P51948 309 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 CLDN8P56748 225 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 RAP1AP62834 184 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 SPAG1Q07617 926 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 PTGES3Q15185 160 aaKnown RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 TFDP3Q5H9I0 405 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 STUMQ69YW2 141 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 TMEM205Q6UW68 189 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 MBOAT2Q6ZWT7 520 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 TMCO2Q7Z6W1 182 aaPredicted RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 MICU2Q8IYU8 434 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 C11orf72Q8NBR9 251 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 OR5W2Q8NH69 310 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 GLYATL2Q8WU03 294 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 APH1BQ8WW43 257 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 NTAN1Q96AB6 310 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 TM4SF18Q96CE8 201 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 SPNS1Q9H2V7 528 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 SYNDIG1Q9H7V2 258 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 MRPL22Q9NWU5 206 aaKnown RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 MYEF2Q9P2K5 600 aaKnown RBP3.15□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF222Q9UK12 451 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 MYO10Q9HD67 2058 aa3.15□□□□□ -1.91
SYNE2-210ENST00000553455 A0A1B0GTQ1 180 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 H7C417 338 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 BCKDKO14874 412 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 LSM8O95777 96 aaKnown RBP3.14□□□□□ -1.91
SYNE2-210ENST00000553455 IFNW1P05000 195 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 PGAM1P18669 254 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 TUBG1P23258 451 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 TNFSF9P41273 254 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 PPP1CBP62140 327 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 RPS15AP62244 130 aaKnown RBP3.14□□□□□ -1.91
SYNE2-210ENST00000553455 ESRRGP62508 458 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 ARG2P78540 354 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 SYCNQ0VAF6 134 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 CDH17Q12864 832 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 PIP5KL1Q5T9C9 394 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 ZNF691Q5VV52 312 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 C12orf54Q6X4T0 127 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 APRG1Q8IVJ8 170 aa3.14□□□□□ -1.91
SYNE2-210ENST00000553455 PGAM4Q8N0Y7 254 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms