RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 RPP25Q9BUL9 199 aaKnown RBP15.75■□□□□ 0.11
SYNE3-202ENST00000553340 AVPR2P30518 371 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 CTAG1AP78358 180 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF117Q03924 483 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 SGCBQ16585 318 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 C1orf100Q5SVJ3 147 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 HAGHLQ6PII5 290 aaPredicted RBP15.75■□□□□ 0.11
SYNE3-202ENST00000553340 CHRDL2Q6WN34 429 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 RHOUQ7L0Q8 258 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 FJX1Q86VR8 437 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 PUSL1Q8N0Z8 303 aaKnown RBP15.75■□□□□ 0.11
SYNE3-202ENST00000553340 METTL27Q8N6F8 245 aaPredicted RBP15.75■□□□□ 0.11
SYNE3-202ENST00000553340 AQP3Q92482 292 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 VSX1Q9NZR4 365 aaPredicted RBP15.75■□□□□ 0.11
SYNE3-202ENST00000553340 MBD2Q9UBB5 411 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 TMED7Q9Y3B3 224 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 DNAH14Q0VDD8 3507 aa15.75■□□□□ 0.11
SYNE3-202ENST00000553340 DOCK8Q8NF50 2099 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 MT-ATP6P00846 226 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 CELA2BP08218 269 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-202ENST00000553340 CTLA4P16410 223 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 RAB6AP20340 208 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 MPZP25189 248 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 GALNSP34059 522 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 ARRB1P49407 418 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-202ENST00000553340 VEGFBP49765 207 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 FAHD2BQ6P2I3 314 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-202ENST00000553340 UNQ6126/PRO20091Q6UXV3 157 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 ARMC10Q8N2F6 343 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 GTPBP8Q8N3Z3 284 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-202ENST00000553340 NKAIN3Q8N8D7 197 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 OR52N5Q8NH56 324 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 FAHD2AQ96GK7 314 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 EMC9Q9Y3B6 208 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 LOC390937A0A1W2PQ73 354 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 FADS1O60427 444 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 STK17BO94768 372 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 ATXN8OSP0DMR3 200 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 AKR1C2P52895 323 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 SLC37A1P57057 533 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 AKR1C1Q04828 323 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF542PQ5EBM4 170 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 TMEM31Q5JXX7 168 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 TRAPPC6BQ86SZ2 158 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 FRMD1Q8N878 549 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF321PQ8N8H1 164 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 OR5AP2Q8NGF4 316 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 FOXRED1Q96CU9 486 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-202ENST00000553340 TXNIPQ9H3M7 391 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 GDF2Q9UK05 429 aaPredicted RBP15.74■□□□□ 0.11
SYNE3-202ENST00000553340 R4GMQ9 66 aa15.74■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF208O43345 1280 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 NUDT14O95848 222 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 VAMP1P23763 118 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 MAOBP27338 520 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 RORAP35398 523 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 SCRN3Q0VDG4 424 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 TOMM34Q15785 309 aaPredicted RBP15.73■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF260Q3ZCT1 412 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 TMEM88Q6PEY1 159 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF813Q6ZN06 617 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 KCTD9Q7L273 389 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 OR13H1Q8NG92 308 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 OR4D6Q8NGJ1 314 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 CASTOR1Q8WTX7 329 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 MRGPRX1Q96LB2 322 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 FBXO9Q9UK97 447 aaPredicted RBP15.73■□□□□ 0.11
SYNE3-202ENST00000553340 RAB22AQ9UL26 194 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 KIF26BQ2KJY2 2108 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 LOC107986453A0A1B0GWG9 222 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 CPED1A4D0V7 1026 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 EEF1E1-BLOC1S5C9J1V9 151 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 FGF16O43320 207 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 ICOSLGO75144 302 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 GLO1Q04760 184 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 GUCA2BQ16661 112 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 HFEQ30201 348 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 LDLRAD3Q86YD5 345 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 PRR22Q8IZ63 422 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 STOML3Q8TAV4 291 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 MRGPRFQ96AM1 343 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 PIK3IP1Q96FE7 263 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 SLC46A1Q96NT5 459 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 RTN4RQ9BZR6 473 aa15.73■□□□□ 0.11
SYNE3-202ENST00000553340 RAB27BO00194 218 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 ISG15P05161 165 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 TPT1P13693 172 aaKnown RBP15.72■□□□□ 0.11
SYNE3-202ENST00000553340 HOXA1P49639 335 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-202ENST00000553340 CHST4Q8NCG5 386 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 OR4K17Q8NGC6 315 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 PNO1Q9NRX1 252 aaKnown RBP15.72■□□□□ 0.11
SYNE3-202ENST00000553340 ZNF629Q9UEG4 869 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-202ENST00000553340 MKL2Q9ULH7 1088 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 CHD9Q3L8U1 2897 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 LRP4O75096 1905 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 C5orf51A6NDU8 294 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 SRSF10O75494 262 aaKnown RBP15.72■□□□□ 0.11
SYNE3-202ENST00000553340 ERCC1P07992 297 aaPredicted RBP15.72■□□□□ 0.11
SYNE3-202ENST00000553340 PSMB6P28072 239 aa15.72■□□□□ 0.11
SYNE3-202ENST00000553340 TFF2Q03403 129 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms