RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MMP16P51512 607 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 SCAND1P57086 179 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 RAC3P60763 192 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 PSMA6P60900 246 aaKnown RBP10.19□□□□□ -0.78
RAB5C-208ENST00000551338 PLA2G7Q13093 441 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 DCAF10Q5QP82 559 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 ABHD17BQ5VST6 288 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 TMEM244Q5VVB8 128 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 RSBN1Q5VWQ0 802 aaPredicted RBP10.19□□□□□ -0.78
RAB5C-208ENST00000551338 ABLIM2Q6H8Q1 611 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 KLHL24Q6TFL4 600 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 PLET1Q6UQ28 207 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 PRSS45Q7RTY3 260 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.19□□□□□ -0.78
RAB5C-208ENST00000551338 ELMOD2Q8IZ81 293 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 DEFB124Q8NES8 71 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 OR2M7Q8NG81 312 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 OR13C3Q8NGS6 347 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 OR6N1Q8NGY5 312 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 RAB40AQ8WXH6 277 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 NABP1Q96AH0 204 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 UPRTQ96BW1 309 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 HAVCR1Q96D42 359 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 SIGLEC12Q96PQ1 595 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 PLEKHA1Q9HB21 404 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 ZFP64Q9NPA5 681 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 DDX28Q9NUL7 540 aaKnown RBP10.19□□□□□ -0.78
RAB5C-208ENST00000551338 STMN3Q9NZ72 180 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 NLKQ9UBE8 527 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 STEAP1Q9UHE8 339 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 NUFIP1Q9UHK0 495 aaKnown RBP10.19□□□□□ -0.78
RAB5C-208ENST00000551338 FOXD3Q9UJU5 478 aaPredicted RBP10.19□□□□□ -0.78
RAB5C-208ENST00000551338 CACNG2Q9Y698 323 aa10.19□□□□□ -0.78
RAB5C-208ENST00000551338 FAM240BA0A1B0GVZ2 78 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 ZNF716A6NP11 495 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 STMND1H3BQB6 276 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 CXCL13O43927 109 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 CD2P06729 351 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 TRAPPC2P0DI81 140 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 TRAPPC2BP0DI82 140 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 TMIGD3P0DMS9 266 aaPredicted RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 GDF1P27539 372 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 CASRP41180 1078 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 PTH2RP49190 550 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 SRP9P49458 86 aaKnown RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 STARP49675 285 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 SELENOPP49908 381 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 NUBP1P53384 320 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 ENDOGQ14249 297 aaKnown RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 PLA1AQ53H76 456 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 SPINK14Q6IE38 97 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 SIAH3Q8IW03 269 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 SERPINA12Q8IW75 414 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 OR51A2Q8NGJ7 313 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 OR2AJ1Q8NGZ0 328 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 OR2V1Q8NHB1 315 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 NKD1Q969G9 470 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 ZFP3Q96NJ6 502 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 FAM173AQ9BQD7 235 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 SF3B5Q9BWJ5 86 aaKnown RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 HES7Q9BYE0 225 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 PBOV1Q9GZY1 135 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 KCNK15Q9H427 330 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 NIPAL2Q9H841 368 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 MOB1AQ9H8S9 216 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 ASH2LQ9UBL3 628 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 BOKQ9UMX3 212 aaPredicted RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 MRPS7Q9Y2R9 242 aaKnown RBP10.18□□□□□ -0.78
RAB5C-208ENST00000551338 RHBDD3Q9Y3P4 386 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 GPR179Q6PRD1 2367 aa10.18□□□□□ -0.78
RAB5C-208ENST00000551338 A0A1B0GTI1 187 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 HMX3A6NHT5 357 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 RER1O15258 196 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 DHHO43323 396 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 SULT1B1O43704 296 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 WDPCPO95876 746 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ITGA5P08648 1049 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 FTH1P19P0C7X4 201 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 MSR1P21757 451 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ANOS1P23352 680 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ITGA3P26006 1051 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 SLC6A1P30531 599 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 EFNB2P52799 333 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 ART1P52961 327 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 GFRA1P56159 465 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 CLDN15P56746 228 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 TAS2R20P59543 309 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 LSM6P62312 80 aaKnown RBP10.17□□□□□ -0.78
RAB5C-208ENST00000551338 GABREP78334 506 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 AIMP2Q13155 320 aaKnown RBP10.17□□□□□ -0.78
RAB5C-208ENST00000551338 KLF9Q13886 244 aaPredicted RBP10.17□□□□□ -0.78
RAB5C-208ENST00000551338 RAB11BQ15907 218 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 LINGO2Q7L985 606 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 BIVMQ86UB2 503 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 LYPD6Q86Y78 171 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 C20orf196Q8IYI0 205 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 OR51D1Q8NGF3 324 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 OR10D3Q8NH80 312 aa10.17□□□□□ -0.78
RAB5C-208ENST00000551338 GCDHQ92947 438 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms