RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 DCNP07585 359 aaKnown RBP2.79□□□□□ -1.96
SNRPF-202ENST00000549580 PNMA6AP0CW24 399 aaPredicted RBP2.79□□□□□ -1.96
SNRPF-202ENST00000549580 OR5H8P0DN80 308 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 ATF6P18850 670 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 F2RP25116 425 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 MAS1LP35410 378 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 CSNK1DP48730 415 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 LHX2P50458 406 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 HMGCS1Q01581 520 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 ZNF33AQ06730 810 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 GTF3C1Q12789 2109 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 SMARCB1Q12824 385 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 IFT88Q13099 833 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 ZSCAN26Q16670 478 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 TMEM183BQ1AE95 376 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 GPR107Q5VW38 600 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 MLIPQ5VWP3 458 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 C6orf120Q7Z4R8 191 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 CBLN2Q8IUK8 224 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 TMEM183AQ8IXX5 376 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 MYOCDQ8IZQ8 938 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 CIDECQ96AQ7 238 aaPredicted RBP2.79□□□□□ -1.96
SNRPF-202ENST00000549580 PDFQ9HBH1 243 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 CD209Q9NNX6 404 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 ABCB10Q9NRK6 738 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 DEC1Q9P2X7 70 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 PSG8Q9UQ74 426 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 CACNG2Q9Y698 323 aa2.79□□□□□ -1.96
SNRPF-202ENST00000549580 CARMIL3Q8ND23 1372 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 ADGRA3Q8IWK6 1321 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 TRAV6A0A075B6T7 132 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 IGHV3-64DA0A0J9YX35 117 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 NCBP2LA6PVI3 153 aaKnown RBP2.78□□□□□ -1.96
SNRPF-202ENST00000549580 RTL8CO15255 209 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 SS18L1O75177 396 aaPredicted RBP2.78□□□□□ -1.96
SNRPF-202ENST00000549580 FARS2O95363 451 aaKnown RBP2.78□□□□□ -1.96
SNRPF-202ENST00000549580 RETP07949 1114 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 KRT16P08779 473 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 NR2C1P13056 603 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 RFC3P40938 356 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 GPR1P46091 355 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 CCNG1P51959 295 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 ZNF138P52744 262 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 POU2AF1Q16633 256 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 C16orf87Q6PH81 154 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 MBOAT2Q6ZWT7 520 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 NPWQ8N729 165 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 TRIML2Q8N7C3 387 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 ZFP41Q8N8Y5 198 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 SPERTQ8NA61 448 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 RNF138Q8WVD3 245 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 TMEM230Q96A57 120 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 CREB3L1Q96BA8 519 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 GALNT14Q96FL9 552 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 FAM210BQ96KR6 192 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 FOXC2Q99958 501 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 MICU1Q9BPX6 476 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 DEFB129Q9H1M3 183 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 GAL3ST2Q9H3Q3 398 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 CD84Q9UIB8 345 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 DDX19BQ9UMR2 479 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 YARS2Q9Y2Z4 477 aaKnown RBP2.78□□□□□ -1.96
SNRPF-202ENST00000549580 CAMTA1Q9Y6Y1 1673 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 ATRXP46100 2492 aa2.78□□□□□ -1.96
SNRPF-202ENST00000549580 M0QX08 132 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 NVLO15381 856 aaKnown RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 ERI3O43414 337 aaKnown RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 XRCC2O43543 280 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 KDELR3O43731 214 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 HOXB8P17481 243 aaPredicted RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 RAB3BP20337 219 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 RAB4AP20338 218 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 PMCHP20382 165 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 CDKN2BP42772 138 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 CXCL5P42830 114 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 HERVK_113P61574 105 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 LCN2P80188 198 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 TCP10Q12799 353 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 QPRTQ15274 297 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 MPPED2Q15777 294 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF829Q3KNS6 432 aaPredicted RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 PIGGQ5H8A4 983 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 THEM4Q5T1C6 240 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 TPTE2P1Q5T6R2 138 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 SLC25A25Q6KCM7 469 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 LINC00336Q6ZUF6 198 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF429Q86V71 674 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 ZNF547Q8IVP9 402 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 C11orf53Q8IXP5 236 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 FAM58AQ8N1B3 248 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 CSGALNACT2Q8N6G5 542 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 ASCC1Q8N9N2 400 aaKnown RBP2.77□□□□□ -1.97
SNRPF-202ENST00000549580 FBXO36Q8NEA4 188 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 OR52E2Q8NGJ4 325 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 OR51L1Q8NGJ5 315 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 OR13C9Q8NGT0 318 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 OR51F2Q8NH61 342 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 IL22RA2Q969J5 263 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 APH1AQ96BI3 265 aa2.77□□□□□ -1.97
SNRPF-202ENST00000549580 CDC42EP4Q9H3Q1 356 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms