RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 FAM192AQ9GZU8 254 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 PNRC2Q9NPJ4 139 aaKnown RBP7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 BABAM2Q9NXR7 383 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 MALT1Q9UDY8 824 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 ENPP5Q9UJA9 477 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TINAGQ9UJW2 476 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 GNG8Q9UK08 70 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 POLR1DQ9Y2S0 133 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 TMEM14AQ9Y6G1 99 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 PRR14LQ5THK1 2151 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 MAST4O15021 2626 aa7.1□□□□□ -1.27
DEPDC4-207ENST00000549249 MYO7BQ6PIF6 2116 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 METTL15A6NJ78 407 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 OR6C65A6NJZ3 312 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF587BE7ETH6 402 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 CCRL2O00421 344 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 RER1O15258 196 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 OGG1O15527 345 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 SLC19A2O60779 497 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 SRSF10O75494 262 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 GABARAPO95166 117 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 IL18BPO95998 194 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 CGAP01215 116 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 TMIGD3P0DMS9 266 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 EDN3P14138 238 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 NPR2P20594 1047 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ANOS1P23352 680 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 CEACAM8P31997 349 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 TIMP3P35625 211 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 TGFBR1P36897 503 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 OPRL1P41146 370 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 NANOS3P60323 173 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 RPS25P62851 125 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 HIST1H3AP68431 136 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ARF1P84077 181 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ROM1Q03395 351 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 FAPQ12884 760 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 AQP6Q13520 282 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 CDK5R1Q15078 307 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 CTF1Q16619 201 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 CCDC92Q53HC0 331 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 HIST2H3PS2Q5TEC6 136 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 FAM27BQ5VT28 67 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 LIPNQ5VXI9 398 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 LIPKQ5VXJ0 399 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 DMKNQ6E0U4 476 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 OR2A2Q6IF42 318 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 NCCRP1Q6ZVX7 275 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 HIST2H3AQ71DI3 136 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 SPATC1Q76KD6 591 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF627Q7L945 461 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF100Q8IYN0 542 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF679Q8IYX0 411 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 LRRC18Q8N456 261 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 YIPF7Q8N8F6 280 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 OR6K3Q8NGY3 331 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 RNF133Q8WVZ7 376 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 C12orf43Q96C57 262 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 SLAMF6Q96DU3 332 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 FBXO17Q96EF6 278 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 PGLYRP3Q96LB9 341 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 DCLRE1CQ96SD1 692 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 SH3GL3Q99963 347 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 TTYH2Q9BSA4 534 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 OR51E2Q9H255 320 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 TP63Q9H3D4 680 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 C1orf198Q9H425 327 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ELOVL3Q9HB03 270 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 NDUFB11Q9NX14 153 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ZNF224Q9NZL3 707 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 NDUFA13Q9P0J0 144 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 ASH2LQ9UBL3 628 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 UPB1Q9UBR1 384 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 IKZF2Q9UKS7 526 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 FBXL3Q9UKT7 428 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 EMC9Q9Y3B6 208 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 LRP12Q9Y561 859 aa7.09□□□□□ -1.27
DEPDC4-207ENST00000549249 HECTD1Q9ULT8 2610 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF503-AS2A6NEH8 195 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 HSPB2A8KAH6 182 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 ZNF878C9JN71 531 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 H3BMQ9 156 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 PRRG2O14669 202 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 PLPP2O43688 288 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 GPX5O75715 221 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 SULT1C4O75897 302 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 KRT33AO76009 404 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 RPP14O95059 124 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 ATE1O95260 518 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 PNPP00491 289 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 KRT8P05787 483 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 HOXD4P09016 255 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 CST2P09228 141 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 MMP7P09237 267 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 PATE4P0C8F1 98 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 GLI4P10075 376 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 CELP19835 753 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 IGHV1-2P23083 117 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 MPGP29372 298 aa7.08□□□□□ -1.28
DEPDC4-207ENST00000549249 CRYBB2P43320 205 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms