RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 EGR3Q06889 387 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 TP53I3Q53FA7 332 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 RFLNBQ8N5W9 214 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 SMAP2Q8WU79 429 aaPredicted RBP17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 SMIM19Q96E16 107 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 DNAJA3Q96EY1 480 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 WDFY2Q96P53 400 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 KCNK17Q96T54 332 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 HDHD5Q9BXW7 423 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 SMURF1Q9HCE7 757 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 CUBNO60494 3623 aa17.59■□□□□ 0.41
CTDSP2-204ENST00000548823 AHRRA9YTQ3 701 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 AKR7A3O95154 331 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 ALOX5APP20292 161 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 CFL1P23528 166 aaKnown RBP17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 SDC2P34741 201 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 C16orf87Q6PH81 154 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 ARL9Q6T311 187 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 TMPPEQ6ZT21 453 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 ABHD4Q8TB40 342 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 PHYHIPQ92561 330 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 ADAD1Q96M93 576 aaKnown RBP17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 OXGR1Q96P68 337 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 SH3GL3Q99963 347 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 B3GAT1Q9P2W7 334 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 DKKL1Q9UK85 242 aa17.58■□□□□ 0.4
CTDSP2-204ENST00000548823 ARPC4-TTLL3A0A0A6YYG9 625 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC35F4A4IF30 521 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 CNOT4O95628 575 aaKnown RBP17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 HLA-DOBP13765 273 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 IFNGR1P15260 489 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 ZNF12P17014 697 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 DNASE1L1P49184 302 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 OR2B6P58173 313 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 LYPD4Q6UWN0 246 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 CCDC190Q86UF4 302 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 TPRA1Q86W33 373 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 OTOSQ8NHW6 89 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 NEIL3Q8TAT5 605 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 FNDC8Q8TC99 324 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 ASB17Q8WXJ9 295 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 AP3S1Q92572 193 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 GNRHR2Q96P88 292 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 OR5B2Q96R09 309 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 PIGQQ9BRB3 760 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 GNG8Q9UK08 70 aa17.57■□□□□ 0.4
CTDSP2-204ENST00000548823 FREM3P0C091 2139 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 OR2M5A3KFT3 312 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 MBD3L4A6NDZ8 208 aaPredicted RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 MBD3L5A6NJ08 208 aaPredicted RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 AQP7P3A6NL99 342 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 GJE1A6NN92 205 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 J3QRK9 145 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 DNPH1O43598 174 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC16A7O60669 478 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 EIF1BO60739 113 aaKnown RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 GATBO75879 557 aaKnown RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 RAC1P63000 192 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 POU3F1Q03052 451 aaPredicted RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 GLO1Q04760 184 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 MELKQ14680 651 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 TMEM176BQ3YBM2 270 aaPredicted RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 ACSF3Q4G176 576 aaPredicted RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 TEX30Q5JUR7 227 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 FAM220AQ7Z4H9 259 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 UEVLDQ8IX04 471 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 ZNF454Q8N9F8 522 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 OR6N2Q8NGY6 317 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 PERPQ96FX8 193 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 DCLRE1CQ96SD1 692 aaKnown RBP17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 JKAMPQ9P055 326 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 LAMP5Q9UJQ1 280 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 RASD1Q9Y272 281 aa17.56■□□□□ 0.4
CTDSP2-204ENST00000548823 TVP23AA6NH52 213 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 CD8B2A6NJW9 211 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 SULT2B1O00204 365 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 CASKO14936 926 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 VAMP5O95183 116 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 ABHD16AO95870 558 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 CD8BP10966 210 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 CTLA4P16410 223 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 GDI2P50395 445 aaKnown RBP17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 H3F3AP84243 136 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 SLC3A1Q07837 685 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 HNRNPA0Q13151 305 aaKnown RBP17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 UNQ9370/PRO34162Q6UXP9 181 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 SYT14Q8NB59 555 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 GHSRQ92847 366 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 MRPL13Q9BYD1 178 aaKnown RBP17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 ACKR4Q9NPB9 350 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 KLHL9Q9P2J3 617 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 ALPK2Q86TB3 2170 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 ANK3Q12955 4377 aaKnown RBP17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 NCKAP5O14513 1909 aa17.55■□□□□ 0.4
CTDSP2-204ENST00000548823 TRBV2A0A0J9YWF9 115 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 A0A1W2PNR3 127 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 EEF1E1-BLOC1S5C9J1V9 151 aa17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 EEF1E1O43324 174 aaKnown RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 KHDRBS3O75525 346 aaKnown RBP17.54■□□□□ 0.4
CTDSP2-204ENST00000548823 KRT8P05787 483 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms