RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 C2CD6Q53TS8 623 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 PAN3Q58A45 887 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 KLF17Q5JT82 389 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 LEMD1Q68G75 181 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CLEC6AQ6EIG7 209 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CTRB2Q6GPI1 263 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4L9Q6RFH8 374 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 TMPRSS11AQ6ZMR5 421 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 GTSCR1Q86UQ5 136 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 PPP1R27Q86WC6 154 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 PIANPQ8IYJ0 282 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 PRELID2Q8N945 189 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 OR6T1Q8NGN1 323 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 NUBPLQ8TB37 319 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 FGGYQ96C11 551 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 FRMD8P1Q9BZ68 369 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 PRSS16Q9NQE7 514 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF275Q9NSD4 429 aaPredicted RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CLN6Q9NWW5 311 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 CTSZQ9UBR2 303 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 DUX4Q9UBX2 424 aa3.31□□□□□ -1.88
SCAF11-210ENST00000547654 RCL1Q9Y2P8 373 aaKnown RBP3.31□□□□□ -1.88
SCAF11-210ENST00000547654 COL18A1P39060 1754 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 LY75O60449 1722 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CCDC144AA2RUR9 1427 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 IGHV3OR16-13A0A075B7E8 117 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 TRAV9-2A0A087WT02 112 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 A6NIZ1 184 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 SAP18O00422 153 aaKnown RBP3.3□□□□□ -1.88
SCAF11-210ENST00000547654 SOCS3O14543 225 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 SLC9A3R1O14745 358 aaPredicted RBP3.3□□□□□ -1.88
SCAF11-210ENST00000547654 GMDSO60547 372 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CRLF1O75462 422 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CDK14O94921 469 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 VAPBO95292 243 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 OR8U8P0C7N1 319 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CALM1P0DP23 149 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CALM2P0DP24 149 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CALM3P0DP25 149 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 IGLL1P15814 213 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 PSMC3P17980 439 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 BGNP21810 368 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 IL2RGP31785 369 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 AQP2P41181 271 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 NBL1P41271 181 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 GLP1RP43220 463 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 RPL34P49207 117 aaKnown RBP3.3□□□□□ -1.88
SCAF11-210ENST00000547654 KLK7P49862 253 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 SUB1P53999 127 aaKnown RBP eCLIP3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CLDN6P56747 220 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 RAP1BP61224 184 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ACVR1Q04771 509 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 STX3Q13277 289 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 LY6DQ14210 128 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 LPAL2Q16609 132 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ZC2HC1BQ5TFG8 222 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 C11orf71Q6IPW1 123 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 WDR74Q6RFH5 385 aaPredicted RBP3.3□□□□□ -1.88
SCAF11-210ENST00000547654 OR2W3Q7Z3T1 314 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 TMEM135Q86UB9 458 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 C17orf78Q8N4C9 275 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CCDC71LQ8N9Z2 235 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ITLN1Q8WWA0 313 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 MED8Q96G25 268 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 TRIM51Q9BSJ1 452 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 CHID1Q9BWS9 393 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 MAP1LC3CQ9BXW4 147 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ADNPQ9H2P0 1102 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 TMEM38AQ9H6F2 299 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 HEXA-AS1Q9H8Q6 139 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 PATZ1Q9HBE1 687 aaKnown RBP3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ACP6Q9NPH0 428 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ASIC3Q9UHC3 531 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 ENPP5Q9UJA9 477 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 GNPTGQ9UJJ9 305 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 KLHL21Q9UJP4 597 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 V9GYY9 64 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 UNC79Q9P2D8 2635 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 PIEZO1Q92508 2521 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 TTC28Q96AY4 2481 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 TOGARAM1Q9Y4F4 1720 aa3.3□□□□□ -1.88
SCAF11-210ENST00000547654 NRXN1Q9ULB1 1477 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 BAHCC1Q9P281 2608 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 MYH15Q9Y2K3 1946 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 IGHV1OR15-1A0A075B7D0 117 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 IGKV1D-8A0A087WSZ0 117 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 IGHV7-81A0A0B4J1V7 117 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 ZNF816-ZNF321PA0A0X1KG74 233 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 A0A1B0GW15 77 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 F6UB75 175 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 PRMT5O14744 637 aaPredicted RBP3.29□□□□□ -1.88
SCAF11-210ENST00000547654 NIPSNAP2O75323 286 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 KBTBD11O94819 623 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 PLEKHA8P1O95397 391 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 RPN2P04844 631 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 S100A6P06703 90 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 RHOCP08134 193 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CT45A6P0DMU7 189 aa3.29□□□□□ -1.88
SCAF11-210ENST00000547654 CT45A5P0DMU8 189 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms