RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 VSX1Q9NZR4 365 aaPredicted RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 ASH2LQ9UBL3 628 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 OPN4Q9UHM6 478 aa11.28□□□□□ -0.6
CPSF6-204ENST00000547486 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
CPSF6-204ENST00000547486 A0A0A6YYJ9 748 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 OR6C6A6NF89 314 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 UNC119BA6NIH7 251 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 DCTN6O00399 190 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 RER1O15258 196 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 TXNDC12O95881 172 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 SEMG1P04279 462 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 SBK2P0C263 348 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 GSTM3P21266 225 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 KITLGP21583 273 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 LSM6P62312 80 aaKnown RBP11.27□□□□□ -0.61
CPSF6-204ENST00000547486 LCN2P80188 198 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 AQP6Q13520 282 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 HLXQ14774 488 aaPredicted RBP11.27□□□□□ -0.61
CPSF6-204ENST00000547486 KCNMB1Q16558 191 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 GPR139Q6DWJ6 353 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 DPY19L2P2Q6ZN68 376 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 ZER1Q7Z7L7 766 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 OR2Z1Q8NG97 314 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 OR1F12Q8NHA8 337 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 DIRC2Q96SL1 478 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 SPAG4Q9NPE6 437 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 TMEM106BQ9NUM4 274 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 PLEK2Q9NYT0 353 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 CGGBP1Q9UFW8 167 aaPredicted RBP11.27□□□□□ -0.61
CPSF6-204ENST00000547486 NPTNQ9Y639 398 aa11.27□□□□□ -0.61
CPSF6-204ENST00000547486 ANK2Q01484 3957 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 A0A0G2JMP0 313 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 A0A0X1KG70 313 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 ISPDA4D126 451 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 HAX1O00165 279 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 IGHV2-70P01814 119 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 EPHA1P21709 976 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 TUBG1P23258 451 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 PRDX6P30041 224 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 MSX2P35548 267 aaPredicted RBP11.26□□□□□ -0.61
CPSF6-204ENST00000547486 HIST1H3AP68431 136 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 SLC3A1Q07837 685 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 MEP1BQ16820 701 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 RSPO1Q2MKA7 263 aaPredicted RBP11.26□□□□□ -0.61
CPSF6-204ENST00000547486 ZMAT1Q5H9K5 638 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 HIST2H3PS2Q5TEC6 136 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 DCAF12L2Q5VW00 463 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 HIST2H3AQ71DI3 136 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 C1QL2Q7Z5L3 287 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 NPEPL1Q8NDH3 523 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 OR4M2Q8NGB6 313 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 PTP4A1Q93096 173 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 SAMD8Q96LT4 415 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 C7orf69Q9H7B7 122 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 GORASP2Q9H8Y8 452 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 SRA1Q9HD15 236 aaKnown RBP11.26□□□□□ -0.61
CPSF6-204ENST00000547486 TUBG2Q9NRH3 451 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 UBAP1Q9NZ09 502 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 PCDHB10Q9UN67 800 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 SAMD4AQ9UPU9 718 aaKnown RBP11.26□□□□□ -0.61
CPSF6-204ENST00000547486 V9GYQ6 96 aa11.26□□□□□ -0.61
CPSF6-204ENST00000547486 IGLV1-36A0A0B4J1U3 117 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 J3QLI3 93 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 PPP1R3DO95685 299 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 RPS6KA3P51812 740 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 RFX4Q33E94 735 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 CORO6Q6QEF8 472 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 SMARCD3Q6STE5 483 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.25□□□□□ -0.61
CPSF6-204ENST00000547486 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
CPSF6-204ENST00000547486 ADCK1Q86TW2 530 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 LRRC28Q86X40 367 aaPredicted RBP11.25□□□□□ -0.61
CPSF6-204ENST00000547486 OR5AS1Q8N127 324 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 OR6V1Q8N148 313 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 ZNF283Q8N7M2 679 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 ZNF418Q8TF45 676 aaPredicted RBP11.25□□□□□ -0.61
CPSF6-204ENST00000547486 ITLN1Q8WWA0 313 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 PYURFQ96I23 114 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 ERMAPQ96PL5 475 aaPredicted RBP11.25□□□□□ -0.61
CPSF6-204ENST00000547486 SIGLEC11Q96RL6 698 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 NDEL1Q9GZM8 345 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 FAM107BQ9H098 131 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 MMP26Q9NRE1 261 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 PTTG3PQ9NZH4 202 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 CD300AQ9UGN4 299 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 B9D1Q9UPM9 204 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 AURKCQ9UQB9 309 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 LHFPL6Q9Y693 200 aa11.25□□□□□ -0.61
CPSF6-204ENST00000547486 TRAPPC2LH3BP13 241 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 SNX3O60493 162 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 GADD45GO95257 159 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 FSHBP01225 129 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 RAC2P15153 192 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 CENPAP49450 140 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 HILS1P60008 231 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 SEC61A1P61619 476 aaKnown RBP11.24□□□□□ -0.61
CPSF6-204ENST00000547486 KRT72Q14CN4 511 aa11.24□□□□□ -0.61
CPSF6-204ENST00000547486 ZMYND11Q15326 602 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms