RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 FAM118AQ9NWS6 357 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 ATPIF1Q9UII2 106 aa17.69■□□□□ 0.42
HMGA2-211ENST00000545998 RPS7P62081 194 aaKnown RBP17.68■□□□□ 0.42
HMGA2-211ENST00000545998 GALK2Q01415 458 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 SNTB2Q13425 540 aaKnown RBP17.68■□□□□ 0.42
HMGA2-211ENST00000545998 ELFN2Q5R3F8 820 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 ZNF544Q6NX49 715 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 MEPCEQ7L2J0 689 aaKnown RBP17.68■□□□□ 0.42
HMGA2-211ENST00000545998 CDH24Q86UP0 819 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 TRUB1Q8WWH5 349 aaKnown RBP17.68■□□□□ 0.42
HMGA2-211ENST00000545998 UBE2FQ969M7 185 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 MAP6Q96JE9 813 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 HDHD2Q9H0R4 259 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 PNRC2Q9NPJ4 139 aaKnown RBP17.68■□□□□ 0.42
HMGA2-211ENST00000545998 IMPAD1Q9NX62 359 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 PLEKHA6Q9Y2H5 1048 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 SPEF1Q9Y4P9 236 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 GMPPBQ9Y5P6 360 aa17.68■□□□□ 0.42
HMGA2-211ENST00000545998 LOC100130705A0A1B0GUX0 176 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 SLC16A6O15403 523 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 TMCC2O75069 709 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 ATE1O95260 518 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 RAF1P04049 648 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 SOD3P08294 240 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 SPARCP09486 303 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 CD53P19397 219 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 CCNOP22674 350 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 PCSK6P29122 969 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 FABP6P51161 128 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 IGFBPL1Q8WX77 278 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 COQ7Q99807 217 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 ZNF442Q9H7R0 627 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 EDARQ9UNE0 448 aa17.67■□□□□ 0.42
HMGA2-211ENST00000545998 ICMTO60725 284 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 APOBEC3AP31941 199 aaPredicted RBP17.66■□□□□ 0.42
HMGA2-211ENST00000545998 TTKP33981 857 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 THBS4P35443 961 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 WNT5AP41221 380 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 LCN1P1Q5VSP4 162 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 TMEM154Q6P9G4 183 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 VHLLQ6RSH7 139 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 DPY19L4Q7Z388 723 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 DCXRQ7Z4W1 244 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 GID4Q8IVV7 300 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 OR10S1Q8NGN2 331 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 OR6N2Q8NGY6 317 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 TMEM171Q8WVE6 324 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 SLC7A6Q92536 515 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 FAIMQ9NVQ4 179 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 H2AFY2Q9P0M6 372 aaPredicted RBP17.66■□□□□ 0.42
HMGA2-211ENST00000545998 MYO9AB2RTY4 2548 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 USF3Q68DE3 2245 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 ARFGEF3Q5TH69 2177 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 ARID1AO14497 2285 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 RRP9O43818 475 aaKnown RBP17.66■□□□□ 0.42
HMGA2-211ENST00000545998 GPRIN2O60269 458 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 SELENOFO60613 162 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 CD8AP01732 235 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 GLRXP35754 106 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 UCP2P55851 309 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 SNRPGP62308 76 aaKnown RBP17.66■□□□□ 0.42
HMGA2-211ENST00000545998 RIPK1Q13546 671 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 KEAP1Q14145 624 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 ADIPOQQ15848 244 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 KRTAP27-1Q3LI81 207 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 DTX2Q86UW9 622 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 MUC15Q8N387 334 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 ST7LQ8TDW4 575 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 NRG4Q8WWG1 115 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 NINJ1Q92982 152 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 CCL19Q99731 98 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 ATF6BQ99941 703 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 LAMP3Q9UQV4 416 aa17.66■□□□□ 0.42
HMGA2-211ENST00000545998 OTOGQ6ZRI0 2925 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 SLC22A31A6NKX4 558 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 DBHP09172 617 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 FAM157BP0CG42 384 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 GGTLC2Q14390 218 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 RSPO1Q2MKA7 263 aaPredicted RBP17.65■□□□□ 0.42
HMGA2-211ENST00000545998 SLC25A30Q5SVS4 291 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 SHFQ7M4L6 423 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 ZNF101Q8IZC7 436 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 FBXL14Q8N1E6 418 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 ZNF555Q8NEP9 628 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 ZNF582Q96NG8 517 aaPredicted RBP17.65■□□□□ 0.42
HMGA2-211ENST00000545998 DNAJC27Q9NZQ0 273 aa17.65■□□□□ 0.42
HMGA2-211ENST00000545998 SMPD2O60906 423 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 OR4A8P0C604 315 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 GABRB1P18505 474 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 DNASE1P24855 282 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 NAA10P41227 235 aaPredicted RBP17.64■□□□□ 0.41
HMGA2-211ENST00000545998 RAD52P43351 418 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 ECH1Q13011 328 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 EIF2B1Q14232 305 aaKnown RBP17.64■□□□□ 0.41
HMGA2-211ENST00000545998 MSMPQ1L6U9 139 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 AGAP6Q5VW22 663 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 SLC16A9Q7RTY1 509 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 ENTHD1Q8IYW4 607 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 OTOSQ8NHW6 89 aa17.64■□□□□ 0.41
HMGA2-211ENST00000545998 C4orf45Q96LM5 186 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms