RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 STRAPQ9Y3F4 350 aaKnown RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 PCYT1BQ9Y5K3 369 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 ANKUB1A6NFN9 424 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 PRICKLE3O43900 615 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 JTBO76095 146 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 GSTP1P09211 210 aaKnown RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 SRFP11831 508 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 XAF1Q6GPH4 301 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 SLC38A9Q8NBW4 561 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 OR51E1Q8TCB6 317 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 EMG1Q92979 244 aaKnown RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 SPNS1Q9H2V7 528 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF705FA8MVS1 300 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 ST8SIA3O43173 380 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 TUSC2O75896 110 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF705DP0CH99 300 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF705BP0CI00 300 aaPredicted RBP11.39□□□□□ -0.59
COL4A6-209ENST00000545689 PNLIPRP3Q17RR3 467 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 OR10K2Q6IF99 312 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 FAM71CQ8NEG0 241 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 TECTBQ96PL2 329 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 PCDHGA5Q9Y5G8 931 aa11.39□□□□□ -0.59
COL4A6-209ENST00000545689 NFYBP25208 207 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 HOXC8P31273 242 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 SCAND1P57086 179 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 BAXQ07812 192 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 STT3BQ8TCJ2 826 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 BARHL1Q9BZE3 327 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 SERTAD4Q9NUC0 356 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 EXOGQ9Y2C4 368 aaKnown RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 HDGFL3Q9Y3E1 203 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 KIF13BQ9NQT8 1826 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 COL5A3P25940 1745 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 NUPL2O15504 423 aaKnown RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 EPXP11678 715 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 GLB1P16278 677 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TBXA2RP21731 343 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TGM4P49221 684 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 PCBP4P57723 403 aaKnown RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TRIM61Q5EBN2 209 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 ARHGEF39Q8N4T4 335 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TP53I13Q8NBR0 393 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 FYTTD1Q96QD9 318 aaKnown RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 NIPSNAP3BQ9BS92 247 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 STMND1H3BQB6 276 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 B4GALT3O60512 393 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 CLDN1O95832 211 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 HCCSP53701 268 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 ALG14Q96F25 216 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 A0A087WUJ7 227 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 IL3RAP26951 378 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 SHEQ5VZ18 495 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 DTWD2Q8NBA8 298 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TMEM229BQ8NBD8 167 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TIMM8BQ9Y5J9 83 aaPredicted RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 XRCC3O43542 346 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 NKX2-2O95096 273 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 SIX6O95475 246 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 IL5P05113 134 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 BTG2P78543 158 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 HNF4GQ14541 408 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 C2orf76Q3KRA6 126 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TMEM196Q5HYL7 178 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 IFI44Q8TCB0 444 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 SLIRPQ9GZT3 109 aaKnown RBP11.38□□□□□ -0.59
COL4A6-209ENST00000545689 PBOV1Q9GZY1 135 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 TAS2R5Q9NYW4 299 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 POLDIP2Q9Y2S7 368 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 BOLA1Q9Y3E2 137 aa11.38□□□□□ -0.59
COL4A6-209ENST00000545689 A0A0B4J2E0 115 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 A0A1B0GX12 115 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 ANKRD34BA5PLL1 514 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 DEGS1O15121 323 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 RAD52P43351 418 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 MRPS34P82930 218 aaKnown RBP11.37□□□□□ -0.59
COL4A6-209ENST00000545689 OR10J5Q8NHC4 309 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 DAZAP1Q96EP5 407 aaKnown RBP11.37□□□□□ -0.59
COL4A6-209ENST00000545689 PLEKHA2Q9HB19 425 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 PCDHB10Q9UN67 800 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 EVPLQ92817 2033 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 HLA-HP01893 362 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 SOX18P35713 384 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF85Q03923 595 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 EXD3Q8N9H8 876 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 PUS1Q9Y606 427 aaKnown RBP eCLIP11.37□□□□□ -0.59
COL4A6-209ENST00000545689 LGALS8O00214 317 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 TCN2P20062 427 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 TGFBR1P36897 503 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 LILRA6Q6PI73 481 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 KIRREL2Q6UWL6 708 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 CATSPERDQ86XM0 798 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 OR2G2Q8NGZ5 317 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 ZNF775Q96BV0 537 aaPredicted RBP11.37□□□□□ -0.59
COL4A6-209ENST00000545689 WWTR1Q9GZV5 400 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 SLC6A13Q9NSD5 602 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 A0A0U1RQK1 487 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 OMGP23515 440 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 GZMKP49863 264 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 KCNAB1Q14722 419 aa11.37□□□□□ -0.59
COL4A6-209ENST00000545689 SHHQ15465 462 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms