RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 HDHD2Q9H0R4 259 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 RNF121Q9H920 327 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 EXOSC4Q9NPD3 245 aaKnown RBP12.09□□□□□ -0.47
SCARB1-209ENST00000545305 GALNT8Q9NY28 637 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 SSR3Q9UNL2 185 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 GTF2A1LQ9UNN4 478 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 TIMM10BQ9Y5J6 103 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 R4GMQ9 66 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 LAMA5O15230 3695 aa12.09□□□□□ -0.47
SCARB1-209ENST00000545305 PHF3Q92576 2039 aaKnown RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 MAP1BP46821 2468 aaKnown RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 TRGV8A0A0C4DH27 118 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 LOC100506127A0A0U1RQW1 187 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 CIB4A0PJX0 185 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 H3BMQ9 156 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 PLPP2O43688 288 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 GPRIN2O60269 458 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 DOK2O60496 412 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 HLA-DPB1P04440 258 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 ITGA5P08648 1049 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 CD8BP10966 210 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 ZNF32P17041 273 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 OPRM1P35372 400 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 FOXG1P55316 489 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 RPS25P62851 125 aaKnown RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 HIST1H3AP68431 136 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 PMPCAQ10713 525 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 ECH1Q13011 328 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 ALKBH1Q13686 389 aaKnown RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 ELFN2Q5R3F8 820 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 HIST2H3PS2Q5TEC6 136 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 TMEM211Q6ICI0 200 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 TMEM53Q6P2H8 277 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 GDPGP1Q6ZNW5 385 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 BEND4Q6ZU67 534 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 HIST2H3AQ71DI3 136 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 SKA3Q8IX90 412 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 NAXEQ8NCW5 288 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 OR10S1Q8NGN2 331 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 C12orf43Q96C57 262 aaKnown RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 STARD4Q96DR4 205 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 DOK1Q99704 481 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 COQ7Q99807 217 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 CHCHD6Q9BRQ6 235 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 COMMD4Q9H0A8 199 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 OR51E2Q9H255 320 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 DDX28Q9NUL7 540 aaKnown RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 SIRT4Q9Y6E7 314 aaPredicted RBP12.08□□□□□ -0.48
SCARB1-209ENST00000545305 SPTA1P02549 2419 aa12.08□□□□□ -0.48
SCARB1-209ENST00000545305 ATMQ13315 3056 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 DSPP15924 2871 aaKnown RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 A0A096LPE4 126 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 A0A1W2PPZ6 126 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 TMEM212A6NML5 194 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 E9PLN8 166 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 LOC110117498-PIK3R3F6TDL0 507 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 SLC22A1O15245 554 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 RGS9O75916 674 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 UBL3O95164 117 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 IL18BPO95998 194 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 SERPINA3P01011 423 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 APOC1P02654 83 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 CD1AP06126 327 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 NR4A1P22736 598 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 IGHV1-2P23083 117 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 HOXC12P31275 282 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 DCTDP32321 178 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 ARR3P36575 388 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 PSMA6P60900 246 aaKnown RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 LSM3P62310 102 aaKnown RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 CCDC92Q53HC0 331 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 BCL2L15Q5TBC7 163 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 MS4A15Q8N5U1 240 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 ZNF283Q8N7M2 679 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 C1orf162Q8NEQ5 155 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 OR2G2Q8NGZ5 317 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 OR5AK2Q8NH90 309 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 BCL2L2Q92843 193 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 RPL3LQ92901 407 aaKnown RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 TMEM203Q969S6 136 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 SPTSSAQ969W0 71 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 C4orf45Q96LM5 186 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 VKORC1Q9BQB6 163 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 OR2H1Q9GZK4 316 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 OPN3Q9H1Y3 402 aaPredicted RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 PIGMQ9H3S5 423 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 MOB1AQ9H8S9 216 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 PNRC2Q9NPJ4 139 aaKnown RBP12.07□□□□□ -0.48
SCARB1-209ENST00000545305 FBXL3Q9UKT7 428 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 SLC5A6Q9Y289 635 aa12.07□□□□□ -0.48
SCARB1-209ENST00000545305 TPRP12270 2363 aaKnown RBP12.06□□□□□ -0.48
SCARB1-209ENST00000545305 TMEM269A0A1B0GVZ9 245 aa12.06□□□□□ -0.48
SCARB1-209ENST00000545305 RAD51DO75771 328 aa12.06□□□□□ -0.48
SCARB1-209ENST00000545305 CGAP01215 116 aa12.06□□□□□ -0.48
SCARB1-209ENST00000545305 CD79AP11912 226 aa12.06□□□□□ -0.48
SCARB1-209ENST00000545305 COX5AP20674 150 aa12.06□□□□□ -0.48
SCARB1-209ENST00000545305 HTR5AP47898 357 aa12.06□□□□□ -0.48
SCARB1-209ENST00000545305 CX3CR1P49238 355 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms