RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 KRTAP1-3Q8IUG1 177 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 C1orf87Q8N0U7 546 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 FTMTQ8N4E7 242 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 CLDN22Q8N7P3 220 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 LRRC75AQ8NAA5 344 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 OR1F12Q8NHA8 337 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 GIPC3Q8TF64 312 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 PTP4A1Q93096 173 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 POM121L2Q96KW2 1035 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 Q96M85 177 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF582Q96NG8 517 aaPredicted RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 SORCS2Q96PQ0 1159 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 MYCBPQ99417 103 aaPredicted RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 PITX2Q99697 317 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 COQ7Q99807 217 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ATF6BQ99941 703 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 BTBD10Q9BSF8 475 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 CHID1Q9BWS9 393 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 DGCR6LQ9BY27 220 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 MRPL37Q9BZE1 423 aaKnown RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 OPA3Q9H6K4 179 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF224Q9NZL3 707 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ADAM18Q9Y3Q7 739 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 LYVE1Q9Y5Y7 322 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 CDH10Q9Y6N8 788 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 ABCA1O95477 2261 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 TGP01266 2768 aa4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 RAI1Q7Z5J4 1906 aaPredicted RBP4.82□□□□□ -1.64
CLSTN3-215ENST00000544584 NOTCH1P46531 2555 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ANK3Q12955 4377 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 IGHV4-30-2A0A087WSY4 118 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 IGHV1-69-2A0A0G2JMI3 117 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 H7C1C5 153 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 GPRIN2O60269 458 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 LMX1BO60663 402 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 CRLF1O75462 422 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 DIRAS1O95057 198 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 TGFAP01135 160 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SEMG1P04279 462 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 MMP7P09237 267 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 PATE4P0C8F1 98 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 IRF2P14316 349 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 HIST1H1CP16403 213 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 CTLA4P16410 223 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ATP6V1B2P21281 511 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 GATA3P23771 443 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 MSX2P35548 267 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ALDH3B1P43353 468 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 GSSP48637 474 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SRP9P49458 86 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 LCN6P62502 163 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 GRB2P62993 217 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 CCL8P80075 99 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 FMODQ06828 376 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 KCNJ8Q15842 424 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 MESTQ5EB52 335 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ELFN2Q5R3F8 820 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 LIPNQ5VXI9 398 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF774Q6NX45 483 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 PGBD2Q6P3X8 592 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SHQ1Q6PI26 577 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 CD300LDQ6UXZ3 194 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 RHOUQ7L0Q8 258 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SHFQ7M4L6 423 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ZBTB46Q86UZ6 589 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 GLCCI1Q86VQ1 547 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 KLBQ86Z14 1044 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF584Q8IVC4 421 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 MUC20Q8N307 709 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 LNX2Q8N448 690 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 KLHL36Q8N4N3 616 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SPICQ8N5J4 248 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 LINC01356Q8N9X3 169 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ATG16L2Q8NAA4 619 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 AQP11Q8NBQ7 271 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 OR10G2Q8NGC3 310 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 OR13G1Q8NGZ3 307 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 AKR7LQ8NHP1 331 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 KLF14Q8TD94 323 aaPredicted RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ITFG2Q969R8 447 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 NABP1Q96AH0 204 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 NRBF2Q96F24 287 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SAMD8Q96LT4 415 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 ZNF75AQ96N20 296 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 FOXN4Q96NZ1 517 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 NMNAT3Q96T66 252 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 TSSK6Q9BXA6 273 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 OSBPL10Q9BXB5 764 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 BPESC1Q9GZL8 116 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 NUAK2Q9H093 628 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 WNT5BQ9H1J7 359 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 TOR3AQ9H497 397 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 SRA1Q9HD15 236 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 TRIM36Q9NQ86 728 aa4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 RPRD1BQ9NQG5 326 aaKnown RBP4.81□□□□□ -1.64
CLSTN3-215ENST00000544584 TAS2R1Q9NYW7 299 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms