RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 OR9K2Q8NGE7 335 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 CIRBP-AS1Q8TBR5 109 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 GPR151Q8TDV0 419 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 RTN4IP1Q8WWV3 396 aaPredicted RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 NT5C3BQ969T7 300 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 PTX4Q96A99 478 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 NTAN1Q96AB6 310 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 DNAJC1Q96KC8 554 aaKnown RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 HSD17B10Q99714 261 aaKnown RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 MICU1Q9BPX6 476 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 SULT4A1Q9BR01 284 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 OR52D1Q9H346 318 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 METTL7AQ9H8H3 244 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 UXTQ9UBK9 157 aaPredicted RBP1.18□□□□□ -2.22
KNTC1-213ENST00000542727 TMCC3Q9ULS5 477 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 USP47Q96K76 1375 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 PCNX2A6NKB5 2137 aa1.18□□□□□ -2.22
KNTC1-213ENST00000542727 VWA8A3KMH1 1905 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 IGLV1-36A0A0B4J1U3 117 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 A0A0U1RQV1 116 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF233A6NK53 670 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF716A6NP11 495 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 LGALS9O00182 355 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 MPHOSPH10O00566 681 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 CXCL11O14625 94 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 KLHL41O60662 606 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 TSPAN13O95857 204 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 CD37P11049 281 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 SLC2A3P11169 496 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 RAB3AP20336 220 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 GPX4P36969 197 aaPredicted RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 TAS2R31P59538 309 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 EIF3EP60228 445 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 KRTAP12-4P60329 112 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ACTR3P61158 418 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 STXBP1P61764 594 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ADARB1P78563 741 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF616Q08AN1 781 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 SLC39A6Q13433 755 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 DDX39BQ13838 428 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 DGCR6Q14129 220 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 OR7A5Q15622 319 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 SSX2Q16385 188 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 MRPL23Q16540 153 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 RAET1LQ5VY80 246 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 AP1ARQ63HQ0 302 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 BRD3OSQ6XYD6 125 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 MBOAT1Q6ZNC8 495 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 BHLHA15Q7RTS1 189 aaPredicted RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 NANOGNBQ7Z5D8 188 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 MRPL55Q7Z7F7 128 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ARL6IP6Q8N6S5 226 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 COX18Q8N8Q8 333 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 OR10AD1Q8NGE0 317 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 OR13C2Q8NGS9 318 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 OR2A1Q8NGT9 310 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 OR13G1Q8NGZ3 307 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 KCNG3Q8TAE7 436 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 UBE2Q2Q8WVN8 375 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 MRGPRFQ96AM1 343 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 DUS3LQ96G46 650 aaKnown RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 TBL1YQ9BQ87 522 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF717Q9BY31 904 aaPredicted RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 FGF23Q9GZV9 251 aaPredicted RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 OR51M1Q9H341 326 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 HRASLS2Q9NWW9 162 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 COX16Q9P0S2 106 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 CRCT1Q9UGL9 99 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 AHDC1Q5TGY3 1603 aaPredicted RBP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.17□□□□□ -2.22
KNTC1-213ENST00000542727 SEC16AO15027 2179 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 CACNA1DQ01668 2161 aa1.17□□□□□ -2.22
KNTC1-213ENST00000542727 SDK2Q58EX2 2172 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 PRR14LQ5THK1 2151 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 IGKV3D-11A0A0A0MRZ8 115 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 IGHV1OR15-9A0A0B4J2B8 117 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 SMCO3A2RU48 225 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 FAM47DPA6NHR8 397 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 A8MUU9 505 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 NDUFC2-KCTD14E9PQ53 114 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 H0YJW9 148 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 SMKR1H3BMG3 65 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 H7C417 338 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 BPY2O14599 106 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 NVLO15381 856 aaKnown RBP1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CLOCKO15516 846 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CHST10O43529 356 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CDC40O60508 579 aaKnown RBP eCLIP1.16□□□□□ -2.22
KNTC1-213ENST00000542727 FKBP6O75344 327 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 REM1O75628 298 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF735P0CB33 412 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 ZNF43P17038 809 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 IL1RNP18510 177 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 ACLYP53396 1101 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 PRRX1P54821 245 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 PPP1CBP62140 327 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 RPS23P62266 143 aaKnown RBP1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CRADDP78560 199 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 QPRTQ15274 297 aa1.16□□□□□ -2.22
KNTC1-213ENST00000542727 CEP55Q53EZ4 464 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms