RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 CIB4A0PJX0 185 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 NAP1L6A6NFF2 107 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 MT-ND4P03905 459 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 CD63P08962 238 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 ATF4P18848 351 aaPredicted RBP12.26□□□□□ -0.45
RTN3-210ENST00000540798 CHAF1BQ13112 559 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 MTFR2Q6P444 385 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 ZNF704Q6ZNC4 412 aaPredicted RBP12.26□□□□□ -0.45
RTN3-210ENST00000540798 BIVMQ86UB2 503 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 GCDHQ92947 438 aaPredicted RBP12.26□□□□□ -0.45
RTN3-210ENST00000540798 CDCP1Q9H5V8 836 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 HHLA2Q9UM44 414 aa12.26□□□□□ -0.45
RTN3-210ENST00000540798 NSG1A0A0A6YYJ2 146 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 LOC390937A0A1W2PQ73 354 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 FAM172BPA6NC97 362 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 H3BSH0 61 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 ACOT7O00154 380 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RAMP1O60894 148 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 C1QBP02746 253 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 YES1P07947 543 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 UBCP0CG48 685 aaKnown RBP12.25□□□□□ -0.45
RTN3-210ENST00000540798 CCR6P51684 374 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 DSCR4P56555 118 aaPredicted RBP12.25□□□□□ -0.45
RTN3-210ENST00000540798 SLC35A1P78382 337 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 CDK10Q15131 360 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 TMPPEQ6ZT21 453 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RHOUQ7L0Q8 258 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 SLAMF6Q96DU3 332 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 NIPAL2Q9H841 368 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 ZNF160Q9HCG1 818 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RHBDD3Q9Y3P4 386 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 LOC107986453A0A1B0GWG9 222 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RAD1O60671 282 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 CTAG2O75638 210 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 OPN1LWP04000 364 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RAB25P57735 213 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 CLRN1P58418 232 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 AP3S2P59780 193 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RAB11BQ15907 218 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 TMEM176BQ3YBM2 270 aaPredicted RBP12.25□□□□□ -0.45
RTN3-210ENST00000540798 PPP1R32Q7Z5V6 425 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 OR2M2Q96R28 347 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 TAS2R4Q9NYW5 299 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 RCE1Q9Y256 329 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 LHFPL6Q9Y693 200 aa12.25□□□□□ -0.45
RTN3-210ENST00000540798 TRAV6A0A075B6T7 132 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 LOC100289279A0A1B0GTE1 492 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 TMEM269A0A1B0GVZ9 245 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 ZIC3O60481 467 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 CD2P06729 351 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 MPLP40238 635 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 EFNB2P52799 333 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 GSG1Q2KHT4 349 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 TMEM255AQ5JRV8 349 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 DCAF12Q5T6F0 453 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 TMEM244Q5VVB8 128 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 TCEAL6Q6IPX3 200 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 CORO6Q6QEF8 472 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 RPS19BP1Q86WX3 136 aaKnown RBP12.24□□□□□ -0.45
RTN3-210ENST00000540798 OR51D1Q8NGF3 324 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 OR1J4Q8NGS1 313 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 DEDD2Q8WXF8 326 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 TCEAL3Q969E4 200 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 TMEM41AQ96HV5 264 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 ACTR6Q9GZN1 396 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 ING3Q9NXR8 418 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 KLK11Q9UBX7 282 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 GTF2A1LQ9UNN4 478 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 NCOR1O75376 2440 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 LOC101059948A0A1B0GTJ6 334 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 STK17BO94768 372 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 H2BFMP0C1H6 154 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 ZNF17P17021 662 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 KLK2P20151 261 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 POU3F4P49335 361 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 GZMKP49863 264 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 CAMK2DQ13557 499 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 OR56B4Q8NH76 319 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 FAM3DQ96BQ1 224 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 SPRY4Q9C004 299 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 C1orf198Q9H425 327 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 CKLFQ9UBR5 152 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 GMDSO60547 372 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 SP9P0CG40 484 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 SFTPDP35247 375 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 ZNF133P52736 654 aaPredicted RBP12.24□□□□□ -0.45
RTN3-210ENST00000540798 TNK1Q13470 666 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 C2orf76Q3KRA6 126 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 H3F3CQ6NXT2 135 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 OR10H5Q8NGA6 315 aa12.24□□□□□ -0.45
RTN3-210ENST00000540798 CACNA1CQ13936 2221 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 GGT3PA6NGU5 568 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 M0R296 226 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 SULT2B1O00204 365 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 LDLRAD4O15165 306 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 TTRP02766 147 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 H2AFB2P0C5Z0 115 aa12.23□□□□□ -0.45
RTN3-210ENST00000540798 ERP29P30040 261 aaKnown RBP12.23□□□□□ -0.45
RTN3-210ENST00000540798 MFAP5Q13361 173 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 170.2 ms