RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 CCNIQ14094 377 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 TSTQ16762 297 aaKnown RBP8.86□□□□□ -0.99
CDCA3-208ENST00000540683 RFX4Q33E94 735 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 FAM98BQ52LJ0 330 aaKnown RBP8.86□□□□□ -0.99
CDCA3-208ENST00000540683 MESTQ5EB52 335 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 ZNF774Q6NX45 483 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 USP51Q70EK9 711 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 KLHL36Q8N4N3 616 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 SPICQ8N5J4 248 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 OR4M2Q8NGB6 313 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 OR1F12Q8NHA8 337 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 CLDND2Q8NHS1 167 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 ZNF418Q8TF45 676 aaPredicted RBP8.86□□□□□ -0.99
CDCA3-208ENST00000540683 APOBEC3DQ96AK3 386 aaPredicted RBP8.86□□□□□ -0.99
CDCA3-208ENST00000540683 ERMAPQ96PL5 475 aaPredicted RBP8.86□□□□□ -0.99
CDCA3-208ENST00000540683 CDRT15Q96T59 188 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 COQ7Q99807 217 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 IFT27Q9BW83 186 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 HCAR1Q9BXC0 346 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 TRIM15Q9C019 465 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 OR2J1Q9GZK6 312 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 RACGAP1Q9H0H5 632 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 SYT4Q9H2B2 425 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 RERGLQ9H628 205 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 ACTR3BQ9P1U1 418 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 MYEF2Q9P2K5 600 aaKnown RBP8.86□□□□□ -0.99
CDCA3-208ENST00000540683 IL19Q9UHD0 177 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 PCDHB10Q9UN67 800 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 BAIAP2Q9UQB8 552 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 ADAM18Q9Y3Q7 739 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 IER3IP1Q9Y5U9 82 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 MALRD1Q5VYJ5 2156 aa8.86□□□□□ -0.99
CDCA3-208ENST00000540683 LRRC30A6NM36 301 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ARPC2O15144 300 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 SPRY3O43610 288 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 RP2O75695 350 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 PNPP00491 289 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 IGHV1-46P01743 117 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ZNF823P16415 610 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 COL8A2P25067 703 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 WNT5AP41221 380 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 MAGEB1P43366 347 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 SRP9P49458 86 aaKnown RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 MMP15P51511 669 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 TNFAIP6P98066 277 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 MZT1Q08AG7 82 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 TSPAN31Q12999 210 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ENDOGQ14249 297 aaKnown RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ALKBH6Q3KRA9 238 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 THSD4Q6ZMP0 1018 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 VASH1Q7L8A9 365 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 PIGWQ7Z7B1 504 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ZDHHC21Q8IVQ6 265 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ZNF101Q8IZC7 436 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 DEFB107AQ8IZN7 70 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 C1orf87Q8N0U7 546 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 MUC20Q8N307 709 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 RNF148Q8N7C7 305 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 OR13G1Q8NGZ3 307 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 OR52J3Q8NH60 311 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ZFAND2BQ8WV99 257 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 CCL17Q92583 94 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 SPTSSAQ969W0 71 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 HAVCR1Q96D42 359 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 SAMD8Q96LT4 415 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 LRGUKQ96M69 825 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ZNF582Q96NG8 517 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 MDFIQ99750 246 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 GAL3ST1Q99999 423 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 TEX12Q9BXU0 123 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 SLC22A4Q9H015 551 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 OR52D1Q9H346 318 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 MAGIXQ9H6Y5 334 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ZNF665Q9H7R5 613 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 SP140LQ9H930 580 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 HIF1ANQ9NWT6 349 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 ASH2LQ9UBL3 628 aa8.85□□□□□ -0.99
CDCA3-208ENST00000540683 COA3Q9Y2R0 106 aaPredicted RBP8.85□□□□□ -0.99
CDCA3-208ENST00000540683 PPIAL4EA0A075B759 164 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 PPIAL4CA0A0B4J2A2 164 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 TRBV4-1A0A0J9YWV2 114 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 PPIAL4DF5H284 164 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 LYNX1G3V0Z9 82 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 H7C1C5 153 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 CDC14BO60729 498 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 FOXH1O75593 365 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 IFNGP01579 166 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 HLA-DQA2P01906 255 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 IGFBP1P08833 259 aaPredicted RBP8.84□□□□□ -0.99
CDCA3-208ENST00000540683 PPIAL4FP0DN26 164 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 LYNX1P0DP58 116 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 CTLA4P16410 223 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 CALB2P22676 271 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 HMGA2P52926 109 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 RAD23AP54725 363 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 LCN6P62502 163 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 COX10Q12887 443 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 CDK5R2Q13319 367 aa8.84□□□□□ -0.99
CDCA3-208ENST00000540683 TRIP10Q15642 601 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms